RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 OR6C75A6NL08 312 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 SLC9A3R1O14745 358 aaPredicted RBP17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 COCHO43405 550 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 HS6ST1O60243 411 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 PRAMEF12O95522 483 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 GALTP07902 379 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 MAPKAPK2P49137 400 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 SRP54P61011 504 aaKnown RBP17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 B2MP61769 119 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 LRRC8DQ7L1W4 858 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 AMIGO1Q86WK6 493 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 OR6K2Q8NGY2 324 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 DEDD2Q8WXF8 326 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 TMEM80Q96HE8 168 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 FYTTD1Q96QD9 318 aaKnown RBP17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 ITPAQ9BY32 194 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 UCKL1Q9NWZ5 548 aa17.57■□□□□ 0.4
SNAPC3-205ENST00000467062 ATP6V1G2-DDX39BF2Z307 99 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 H3BNC9 293 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 H3BQ06 376 aaPredicted RBP17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 GNGT2O14610 69 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 PDGFAP04085 211 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 FMO3P31513 532 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 CASP2P42575 452 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 MAPK12P53778 367 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 FAM214AQ32MH5 1076 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 CREB3L2Q70SY1 520 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 B3GNT8Q7Z7M8 397 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 FBXO39Q8N4B4 442 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 FBXO22Q8NEZ5 403 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 EEF1AKMT1Q8WVE0 214 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 FATE1Q969F0 183 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 SCLYQ96I15 445 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 PIF1Q9H611 641 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 COMMD8Q9NX08 183 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 GLTPQ9NZD2 209 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 TNFRSF10DQ9UBN6 386 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 EIF3KQ9UBQ5 218 aaKnown RBP17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 POLG2Q9UHN1 485 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 TBC1D24Q9ULP9 559 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 FNDC1Q4ZHG4 1894 aaPredicted RBP17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 PATJQ8NI35 1801 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 OR2A25A4D2G3 310 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 C2orf78A6NCI8 922 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 INSIG1O15503 277 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 IFI30P13284 250 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 CORO1AP31146 461 aaKnown RBP17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 C18orf21Q32NC0 220 aaPredicted RBP17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 ZRANB3Q5FWF4 1079 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 ZC3H12BQ5HYM0 836 aaKnown RBP17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 ARMC4Q5T2S8 1044 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 OR8H2Q8N162 312 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 SH3KBP1Q96B97 665 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 NEDD4LQ96PU5 975 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 MGME1Q9BQP7 344 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 ZNF304Q9HCX3 659 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 SDR39U1Q9NRG7 319 aaPredicted RBP17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 TRMT6Q9UJA5 497 aaKnown RBP17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 ZNF225Q9UK10 706 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 LRFN2Q9ULH4 789 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 GREB1Q4ZG55 1949 aa17.56■□□□□ 0.4
SNAPC3-205ENST00000467062 OR6C70A6NIJ9 312 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 CRCPO75575 148 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 CST1P01037 141 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 ANXA6P08133 673 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 ZDHHC11BP0C7U3 371 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 CBLP22681 906 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 ZNF140P52738 457 aaPredicted RBP17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 KCNK10P57789 538 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 SP3Q02447 781 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 RING1Q06587 406 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 RAB44Q7Z6P3 723 aaPredicted RBP17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 ZNF540Q8NDQ6 660 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 OR2A14Q96R47 310 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 TM9SF2Q99805 663 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 TTPALQ9BTX7 342 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 C14orf119Q9NWQ9 140 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 TAS2R13Q9NYV9 303 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 SLAMF8Q9P0V8 285 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 TRAPPC4Q9Y296 219 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 AP3M1Q9Y2T2 418 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 RAI2Q9Y5P3 530 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 DSCR3O14972 297 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 EPOP01588 193 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 MC4RP32245 332 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 STK11Q15831 433 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 RNF219Q5W0B1 726 aaPredicted RBP17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 GPR150Q8NGU9 434 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 CD99L2Q8TCZ2 262 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 FUBP1Q96AE4 644 aaKnown RBP17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 LRRC3Q9BY71 257 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 UCK2Q9BZX2 261 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 NLE1Q9NVX2 485 aaPredicted RBP17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 NUFIP1Q9UHK0 495 aaKnown RBP17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 AGO1Q9UL18 857 aaKnown RBP17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 HSPE1-MOB4S4R3N1 261 aa17.55■□□□□ 0.4
SNAPC3-205ENST00000467062 A8MX80 341 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 STX7O15400 261 aaKnown RBP17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 DFNA5O60443 496 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms