RNA–Protein interactions for RNA: ENST00000466342.1

SQSTM1-206, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 808 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-206ENST00000466342 DIAPH2O60879 1101 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 MATN4O95460 622 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 ABHD2P08910 425 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 MPC1LP0DKB6 136 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 MCM3P25205 808 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 ACY1Q03154 408 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 PDAP1Q13442 181 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 TESK1Q15569 626 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 PLEKHN1Q494U1 663 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 GRTP1Q5TC63 336 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 LRRC8EQ6NSJ5 796 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 ARMC6Q6NXE6 501 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 SPNS3Q6ZMD2 512 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 GDF7Q7Z4P5 450 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 PPP1R3BQ86XI6 285 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 RASGRP3Q8IV61 690 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 DCUN1D3Q8IWE4 304 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 CISD2Q8N5K1 135 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 OR52E1Q8NGJ3 308 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 CFAP61Q8NHU2 1237 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 CT55Q8WUE5 264 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 LCN9Q8WX39 176 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 FOPNLQ96NB1 174 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 CYTH2Q99418 400 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 GPR22Q99680 433 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 MAP3K3Q99759 626 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 TFB2MQ9H5Q4 396 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 LHX9Q9NQ69 397 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 RUVBL2Q9Y230 463 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 NFS1Q9Y697 457 aa11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 V9GYY5 206 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 SNRNP200O75643 2136 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-206ENST00000466342 CCDC168Q8NDH2 2452 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 OR6C74A6NCV1 312 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 MATN2O00339 956 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 RIPK2O43353 540 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 KDM1AO60341 852 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 PSIP1O75475 530 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 FAM155BO75949 473 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 C1orf105O95561 183 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 SAT1P21673 171 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 SHMT2P34897 504 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 SPRP35270 261 aaPredicted RBP11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 CCNFP41002 786 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 ARL4DP49703 201 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 RGS4P49798 205 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 TAS2R39P59534 338 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 PPP1CAP62136 330 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 VSNL1P62760 191 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 HSD11B2P80365 405 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 POU4F1Q01851 419 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 PRKG2Q13237 762 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 ERCC6LQ2NKX8 1250 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 WDR93Q6P2C0 686 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 TTC23LQ6PF05 361 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 PAQR3Q6TCH7 311 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 FDCSPQ8NFU4 85 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 GPR87Q9BY21 358 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 SRMSQ9H3Y6 488 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 POPDC3Q9HBV1 291 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 RARRES3Q9UL19 164 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 G3BP2Q9UN86 482 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 ICKQ9UPZ9 632 aa11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 TDRKHQ9Y2W6 561 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 MTO1Q9Y2Z2 717 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-206ENST00000466342 ZBTB11O95625 1053 aaPredicted RBP11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 TPBGLP0DKB5 382 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 FOLR1P15328 257 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 ZNF37AP17032 561 aaPredicted RBP11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 PTPN4P29074 926 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 PKLRP30613 574 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 PTGER4P35408 488 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 BDKRB1P46663 353 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 PGGT1BP53609 377 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 SLC12A2P55011 1212 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 IL2P60568 153 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 PRKAA1Q13131 559 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 TUBB3Q13509 450 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 GRB7Q14451 532 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 USP10Q14694 798 aaKnown RBP11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 TMTC4Q5T4D3 741 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 CYHR1Q6ZMK1 362 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 PIWIL4Q7Z3Z4 852 aaKnown RBP11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 SYVN1Q86TM6 617 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 AMIGO1Q86WK6 493 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 CEP97Q8IW35 865 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 MYO1HQ8N1T3 1032 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 D2HGDHQ8N465 521 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 OR4E2Q8NGC2 313 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 OR8K5Q8NH50 307 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 UHMK1Q8TAS1 419 aaKnown RBP11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 MAGEC3Q8TD91 643 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 EEF1AKMT1Q8WVE0 214 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 SLC44A1Q8WWI5 657 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 RAD51AP1Q96B01 352 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 LINGO1Q96FE5 620 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 TSPAN17Q96FV3 270 aa11.45□□□□□ -0.58
SQSTM1-206ENST00000466342 PAFAH2Q99487 392 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms