RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SLC30A3Q99726 388 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 BTBD10Q9BSF8 475 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 C1orf21Q9H246 121 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 MMADHCQ9H3L0 296 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 SEMA6CQ9H3T2 930 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 MEAF6Q9HAF1 191 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 SLC40A1Q9NP59 571 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 MBNL1Q9NR56 388 aaKnown RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 ARL8BQ9NVJ2 186 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 CD274Q9NZQ7 290 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 ANAPC2Q9UJX6 822 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 TRAF6Q9Y4K3 522 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 OARD1Q9Y530 152 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 RNF215Q9Y6U7 377 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 SHANK1Q9Y566 2161 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 AREL1O15033 823 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 SLC16A5O15375 505 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 GYG2O15488 501 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 NUAK1O60285 661 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 RASSF9O75901 435 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 CHEK2O96017 543 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 C8GP07360 202 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 MPC1LP0DKB6 136 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 VCLP18206 1134 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 NCF2P19878 526 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-215ENST00000465457 CCR10P46092 362 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 PIK3CGP48736 1102 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 CDKL1Q00532 357 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 CLCQ05315 142 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 ACOX1Q15067 660 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 PCBP2Q15366 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC6-215ENST00000465457 TGFBIQ15582 683 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 SLC9B1Q4ZJI4 515 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 Q6ZVL8 140 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 TCAIMQ8N3R3 496 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 CLDN19Q8N6F1 224 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 OR56A4Q8NGH8 313 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 AGR3Q8TD06 166 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 UBTD2Q8WUN7 234 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 NKD1Q969G9 470 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 TSACCQ96A04 125 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-215ENST00000465457 AP2M1Q96CW1 435 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 DTD2Q96FN9 168 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 TMEM74Q96NL1 305 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 LENG8Q96PV6 779 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-215ENST00000465457 TRIM54Q9BYV2 358 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 NUF2Q9BZD4 464 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 ARMCX1Q9P291 453 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 GALPQ9UBC7 116 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 PCDHB11Q9Y5F2 797 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 PRSS21Q9Y6M0 314 aa13.41□□□□□ -0.26
HDAC6-215ENST00000465457 TNRC6AQ8NDV7 1962 aaKnown RBP13.41□□□□□ -0.26
HDAC6-215ENST00000465457 IQCF5A8MTL0 148 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-215ENST00000465457 AZIN1O14977 448 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 AP1G1O43747 822 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 DUX1O43812 170 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 AOAHP28039 575 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 ETV3P41162 512 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 MLLT10P55197 1068 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 B4GALNT1Q00973 533 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 DPTQ07507 201 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 SGCGQ13326 291 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 RIPK1Q13546 671 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 GBX1Q14549 363 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 HERC3Q15034 1050 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 PDCD2Q16342 344 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-215ENST00000465457 PPP1R3AQ16821 1122 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 ALG11Q2TAA5 492 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 PHF19Q5T6S3 580 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 VWA5B1Q5TIE3 1220 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 KANK2Q63ZY3 851 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 SULT1C3Q6IMI6 304 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 CYB5D1Q6P9G0 228 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 SBSNQ6UWP8 590 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 SPRED1Q7Z699 444 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 RCBTB1Q8NDN9 531 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 C9orf43Q8TAL5 461 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-215ENST00000465457 GLYATL1Q969I3 302 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 ZNF382Q96SR6 550 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 RIOK2Q9BVS4 552 aaKnown RBP13.4□□□□□ -0.26
HDAC6-215ENST00000465457 MID1IP1Q9NPA3 183 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 PCTPQ9UKL6 214 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 GPR34Q9UPC5 381 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 DOLKQ9UPQ8 538 aa13.4□□□□□ -0.26
HDAC6-215ENST00000465457 ESPL1Q14674 2120 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 A1L4Q6 167 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 E9PBE3 544 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 TMX2-CTNND1H3BSU7 103 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 K7EM74 188 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 SDHDO14521 159 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 NEMP1O14524 444 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 TSPAN6O43657 245 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 KLHL41O60662 606 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 CRCPO75575 148 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 CDK14O94921 469 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ESRRBO95718 433 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ENO1P06733 434 aaKnown RBP13.39□□□□□ -0.27
HDAC6-215ENST00000465457 THRAP10827 490 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms