RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	CCDC170	Q8IYT3	715 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RNF168	Q8IYW5	571 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CLIP4	Q8N3C7	705 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FAM133A	Q8N9E0	248 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TRIM58	Q8NG06	486 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HMGCLL1	Q8TB92	370 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SUN5	Q8TC36	379 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	BRSK1	Q8TDC3	778 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TRPC4AP	Q8TEL6	797 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RRNAD1	Q96FB5	475 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	THOC1	Q96FV9	657 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	METTL2A	Q96IZ6	378 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HARBI1	Q96MB7	349 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ACOX2	Q99424	681 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TREX2	Q9BQ50	279 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZPBP	Q9BS86	351 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PANK2	Q9BZ23	570 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TSGA10	Q9BZW7	698 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CCDC68	Q9H2F9	335 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TBC1D7	Q9P0N9	293 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ADD3	Q9UEY8	706 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FBXO2	Q9UK22	296 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GPR34	Q9UPC5	381 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MTMR6	Q9Y217	621 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TMED5	Q9Y3A6	229 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GMEB1	Q9Y692	573 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MAU2	Q9Y6X3	613 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ATXN2	Q99700	1313 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NBEAL2	Q6ZNJ1	2754 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MYH1	P12882	1939 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PCDH15	Q96QU1	1955 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SDK2	Q58EX2	2172 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GON4L	Q3T8J9	2241 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GPR75-ASB3	A0A0A6YYF3	556 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278		E7EWF7	191 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278		M0QX08	132 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	WNT9B	O14905	357 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ATP8B1	O43520	1251 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	AHCYL1	O43865	530 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	JRK	O75564	520 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GJB3	O75712	270 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	IDH1	O75874	414 aa	Known RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PAPSS2	O95340	614 aa	Predicted RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	OR2C1	O95371	312 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CAST	P20810	708 aa	Known RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MAOA	P21397	527 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HOXC13	P31276	330 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GNL1	P36915	607 aa	Predicted RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	UBA7	P41226	1012 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NOV	P48745	357 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FNTA	P49354	379 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CLNS1A	P54105	237 aa	Known RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TPM4	P67936	248 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CREB5	Q02930	508 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MECOM	Q03112	1051 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GRIK2	Q13002	908 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CDC16	Q13042	620 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FHL1	Q13642	323 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DHX34	Q14147	1143 aa	Known RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RASA2	Q15283	850 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RCN1	Q15293	331 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	INA	Q16352	499 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	XKR9	Q5GH70	373 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SPATA1	Q5VX52	437 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DUS1L	Q6P1R4	473 aa	Known RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	BLOC1S2	Q6QNY1	142 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CACNA2D4	Q7Z3S7	1137 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	KBTBD6	Q86V97	674 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	IQCF1	Q8N6M8	205 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278		Q8N9P0	234 aa	Predicted RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HJURP	Q8NCD3	748 aa	Predicted RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZFAND2B	Q8WV99	257 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ELMOD3	Q96FG2	381 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CFAP36	Q96G28	342 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF274	Q96GC6	653 aa	Predicted RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	JAKMIP1	Q96N16	626 aa	Known RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SRSF8	Q9BRL6	282 aa	Known RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SYNC	Q9H7C4	482 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MMP25	Q9NPA2	562 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TBC1D29	Q9UFV1	150 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TINAG	Q9UJW2	476 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	VPS28	Q9UK41	221 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GTF3C4	Q9UKN8	822 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NENF	Q9UMX5	172 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278		Q9Y3F1	56 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PHLPP2	Q6ZVD8	1323 aa		4.87	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HELZ	P42694	1942 aa	Known RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GREB1L	Q9C091	1923 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DOCK6	Q96HP0	2047 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GOLGA6L4	A6NEF3	574 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C2orf81	A6NN90	581 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	KIF2A	O00139	706 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CYTH3	O43739	400 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SYNCRIP	O60506	623 aa	Known RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NDUFS3	O75489	264 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NGFR	P08138	427 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SFTPC	P11686	197 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CDH2	P19022	906 aa	Predicted RBP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms