RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FASTKQ14296 549 aaKnown RBP16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 ARHGAP19Q14CB8 494 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 HERC3Q15034 1050 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 PLCL1Q15111 1095 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 INAVAQ3KP66 663 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 ZNF438Q7Z4V0 828 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 AMIGO1Q86WK6 493 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 LRRC56Q8IYG6 542 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 C2orf73Q8N5S3 287 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 PPFIBP2Q8ND30 876 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 CEP70Q8NHQ1 597 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 SETD7Q8WTS6 366 aaKnown RBP16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 ATL1Q8WXF7 558 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 SLC38A3Q99624 504 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 SRMSQ9H3Y6 488 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 WDR55Q9H6Y2 383 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 MEAF6Q9HAF1 191 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 ACSS2Q9NR19 701 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 SPEGQ15772 3267 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 SDHDO14521 159 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 SH3BP5O60239 455 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 SIX3O95343 332 aaPredicted RBP16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 EPHA3P29320 983 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 GDF5P43026 501 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 NAE1Q13564 534 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 ANKS6Q68DC2 871 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 SYTL1Q8IYJ3 562 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 TCAIMQ8N3R3 496 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 OR2L8Q8NGY9 312 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 HMGCLL1Q8TB92 370 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 TMEM79Q9BSE2 394 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 RAB11FIP5Q9BXF6 653 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 DENND2DQ9H6A0 471 aaPredicted RBP16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 WWOXQ9NZC7 414 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 OR6C2Q9NZP2 312 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 TRAF6Q9Y4K3 522 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 ASB1Q9Y576 335 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 CPED1A4D0V7 1026 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 EME2A4GXA9 379 aaPredicted RBP16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 LRRC14BA6NHZ5 514 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 LILRA5A6NI73 299 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 SUPT7LO94864 414 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 THRAP10827 490 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 CKMT1AP12532 417 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 COX4I1P13073 169 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 SHMT2P34897 504 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 CPA2P48052 419 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 HSPA7P48741 367 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 PTCHD3Q3KNS1 767 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 STPG1Q5TH74 334 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 GUSBP11Q6P575 273 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 ADGRF3Q8IZF5 1079 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 RAB42Q8N4Z0 105 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 OR6C4Q8NGE1 309 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 OR56A3Q8NH54 315 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 AGAP11Q8TF27 550 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 PYCR2Q96C36 320 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 RTKNQ9BST9 563 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 SHCBP1LQ9BZQ2 653 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 CD244Q9BZW8 370 aa16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 INTS7Q9NVH2 962 aaKnown RBP16.34■□□□□ 0.21
EXOSC3-203ENST00000465229 RP1P56715 2156 aa16.33■□□□□ 0.21
EXOSC3-203ENST00000465229 OR6C74A6NCV1 312 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 BTN3A3O00478 584 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 CBFA2T3O75081 653 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 EZRP15311 586 aaKnown RBP16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 ALDH4A1P30038 563 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 GPR3P46089 330 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 SLC6A12P48065 614 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 BTKQ06187 659 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 NR1D2Q14995 579 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 PCBP2Q15366 365 aaKnown RBP eCLIP16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 PDCD2Q16342 344 aaPredicted RBP16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 SUSD1Q6UWL2 747 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 CHSY3Q70JA7 882 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 NAXDQ8IW45 347 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 CLYBLQ8N0X4 340 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 RP9Q8TA86 221 aaKnown RBP16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 UBTD2Q8WUN7 234 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 SMPDL3AQ92484 453 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 CCDC74AQ96AQ1 378 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 CNDP2Q96KP4 475 aaKnown RBP16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 TWSG1Q9GZX9 223 aa16.33■□□□□ 0.2
EXOSC3-203ENST00000465229 A0A1W2PPV9 198 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 FAM221BA6H8Z2 402 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 ZNF839A8K0R7 811 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 TMEM233B4DJY2 109 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 UBFD1O14562 309 aaKnown RBP16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 B4GAT1O43505 415 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 PEX11AO75192 247 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 STK16O75716 305 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 UBXN7O94888 489 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 LDOC1O95751 146 aaPredicted RBP16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 JUNP05412 331 aaKnown RBP16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 PNLIPP16233 465 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 TYRP1P17643 537 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 PIK3R1P27986 724 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 EEF1DP29692 281 aaKnown RBP16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 OR1D5P58170 312 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms