RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ALBP02768 609 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 IMPA1P29218 277 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 CARSP49589 748 aaKnown RBP18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 TAP2Q03519 686 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 VWA5B1Q5TIE3 1220 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 UGT3A1Q6NUS8 523 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 FBXO42Q6P3S6 717 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 CYHR1Q6ZMK1 362 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 ATCAYQ86WG3 371 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 IGDCC3Q8IVU1 814 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 FBXO15Q8NCQ5 510 aaPredicted RBP18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 CPT1CQ8TCG5 803 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 CERS2Q96G23 380 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 C10orf90Q96M02 699 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 NAPGQ99747 312 aaPredicted RBP18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 WDR54Q9H977 334 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 ZNF304Q9HCX3 659 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 MAP10Q9P2G4 905 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 FBXL4Q9UKA2 621 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 PYCARDQ9ULZ3 195 aa18.4■□□□□ 0.54
CCHCR1-210ENST00000464012 GFYI3L273 518 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 HAT1O14929 419 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 FBLP22087 321 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 MMP11P24347 488 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 IVDP26440 423 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 DR1Q01658 176 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 PRDX1Q06830 199 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 MYBPC3Q14896 1274 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 RBBP7Q16576 425 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 MUM1Q2TAK8 710 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 HKDC1Q2TB90 917 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 PRR30Q53SZ7 412 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 SLC6A19Q695T7 634 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 JMJD6Q6NYC1 403 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 PLD3Q8IV08 490 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 CSNK1A1LQ8N752 337 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 RBMXL3Q8N7X1 1067 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 EEF1AKMT1Q8WVE0 214 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 TRIM31Q9BZY9 425 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 SLC26A1Q9H2B4 701 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 ASH1LQ9NR48 2969 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 ENAMQ9NRM1 1142 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 CUEDC1Q9NWM3 386 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 UTP6Q9NYH9 597 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 TAS2R13Q9NYV9 303 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 NXT1Q9UKK6 140 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 ADAMTS6Q9UKP5 1117 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 RUVBL1Q9Y265 456 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 SHANK1Q9Y566 2161 aa18.39■□□□□ 0.53
CCHCR1-210ENST00000464012 SOCS6O14544 535 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 FFAR3O14843 346 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 GPR42O15529 346 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 TTI1O43156 1089 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 SORBS2O94875 1100 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 ONECUT2O95948 504 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 STATHP02808 62 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 ITGA3P26006 1051 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 GABRB3P28472 473 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 ELK3P41970 407 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 SKIV2L2P42285 1042 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 UQCRFS1P47985 274 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 RGS4P49798 205 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 CDKN2DP55273 166 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 TIAL1Q01085 375 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 OCA2Q04671 838 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 MORF4L2Q15014 288 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 PRTGQ2VWP7 1150 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 ZNF425Q6IV72 752 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 MBOAT1Q6ZNC8 495 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 CREG2Q8IUH2 290 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 PDIK1LQ8N165 341 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 MYO1HQ8N1T3 1032 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 RERGQ96A58 199 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 NAT9Q9BTE0 207 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 CRB3Q9BUF7 120 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 YIPF2Q9BWQ6 316 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 ATP13A2Q9NQ11 1180 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 SLAMF7Q9NQ25 335 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 CCDC177Q9NQR7 707 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 HS3ST3B1Q9Y662 390 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 SAR1BQ9Y6B6 198 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 SPENQ96T58 3664 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 NBASA2RRP1 2371 aa18.38■□□□□ 0.53
CCHCR1-210ENST00000464012 EIF3FO00303 357 aaPredicted RBP18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 VPS4BO75351 444 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 AHSGP02765 367 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 ALPPP05187 535 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 EZRP15311 586 aaKnown RBP18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 CD97P48960 835 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 PGGT1BP53609 377 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 ITGA8P53708 1063 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 TBPL1P62380 186 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 KLC1Q07866 573 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 AIMP2Q13155 320 aaKnown RBP18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 LRRC8EQ6NSJ5 796 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 PRMT9Q6P2P2 845 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 PAQR3Q6TCH7 311 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 SYDE1Q6ZW31 735 aaPredicted RBP18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 HPS6Q86YV9 775 aa18.37■□□□□ 0.53
CCHCR1-210ENST00000464012 PALM2Q8IXS6 379 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms