RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 CDC16Q13042 620 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 CAMK2BQ13554 666 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 TMTC4Q5T4D3 741 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 SLC22A9Q8IVM8 553 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 BMPERQ8N8U9 685 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 ABHD11Q8NFV4 315 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 SLC5A11Q8WWX8 675 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 NEIL2Q969S2 332 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 ARL8AQ96BM9 186 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 CCDC126Q96EE4 140 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 C1QTNF3Q9BXJ4 246 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 FAM60AQ9NP50 221 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 CUEDC1Q9NWM3 386 aaPredicted RBP17.17■□□□□ 0.34
FAM239A-203ENST00000456563 OCIAD1Q9NX40 245 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 KLK13Q9UKR3 277 aa17.17■□□□□ 0.34
FAM239A-203ENST00000456563 SPEGQ15772 3267 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 LRRC14BA6NHZ5 514 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 EFCAB7A8K855 629 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 PRPF4O43172 522 aaKnown RBP eCLIP17.16■□□□□ 0.34
FAM239A-203ENST00000456563 SIX3O95343 332 aaPredicted RBP17.16■□□□□ 0.34
FAM239A-203ENST00000456563 MYL2P10916 166 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 FGF3P11487 239 aaPredicted RBP17.16■□□□□ 0.34
FAM239A-203ENST00000456563 CDH1P12830 882 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 CCL4P13236 92 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 CPA3P15088 417 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 FOLR1P15328 257 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 GNAZP19086 355 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 EEF1DP29692 281 aaKnown RBP17.16■□□□□ 0.34
FAM239A-203ENST00000456563 MLLT3P42568 568 aaPredicted RBP17.16■□□□□ 0.34
FAM239A-203ENST00000456563 GABRA4P48169 554 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 PRKAA2P54646 552 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 MC2RQ01718 297 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 ACY1Q03154 408 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 PCDH1Q08174 1060 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 KCNAB1Q14722 419 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 PDK4Q16654 411 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 PAQR7Q86WK9 346 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 DNAJC22Q8N4W6 341 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 CCDC63Q8NA47 563 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 ARMC2Q8NEN0 867 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 OR4K1Q8NGD4 311 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 FAM111AQ96PZ2 611 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 SCNM1Q9BWG6 230 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 NRSN2Q9GZP1 204 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 ACBD3Q9H3P7 528 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 FBXO8Q9NRD0 319 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 SLC17A7Q9P2U7 560 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 COPG2Q9UBF2 871 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 SATB2Q9UPW6 733 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 NEUROG3Q9Y4Z2 214 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 PCDHGA8Q9Y5G5 932 aa17.16■□□□□ 0.34
FAM239A-203ENST00000456563 PCM1Q15154 2024 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 KNTC1P50748 2209 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 H7BY64 318 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 E2F3O00716 465 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 RPS17P08708 135 aaKnown RBP17.15■□□□□ 0.34
FAM239A-203ENST00000456563 JMJD7P0C870 316 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 EBLN1P0CF75 366 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 EPORP19235 508 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 IMPDH1P20839 514 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 PIK3CGP48736 1102 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 CCR8P51685 355 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 MAGOHP61326 146 aaKnown RBP17.15■□□□□ 0.34
FAM239A-203ENST00000456563 HERVK_113P63132 956 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 SH3BP2P78314 561 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 CSNK1G2P78368 415 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 ZC3H12BQ5HYM0 836 aaKnown RBP17.15■□□□□ 0.34
FAM239A-203ENST00000456563 C3orf38Q5JPI3 329 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 CYB5D1Q6P9G0 228 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 NXPE4Q6UWF7 544 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 ERMP1Q7Z2K6 904 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 FAM129CQ86XR2 697 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 SNX31Q8N9S9 440 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 PRR11Q96HE9 360 aaPredicted RBP17.15■□□□□ 0.34
FAM239A-203ENST00000456563 PRAP1Q96NZ9 151 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 ERVK-6Q9BXR3 956 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 POLR1BQ9H9Y6 1135 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 PELI2Q9HAT8 420 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 PILRAQ9UKJ1 303 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 PCTPQ9UKL6 214 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 MSRB2Q9Y3D2 182 aa17.15■□□□□ 0.34
FAM239A-203ENST00000456563 E7EQ34 232 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 AGRPO00253 132 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 CLGNO14967 610 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 TM9SF1O15321 606 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 ATP8B1O43520 1251 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 CTSVO60911 334 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 KATNA1O75449 491 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 C1GALT1C1LP0DN25 315 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 HGFP14210 728 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 EZRP15311 586 aaKnown RBP17.14■□□□□ 0.33
FAM239A-203ENST00000456563 EPB42P16452 691 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 ITIH1P19827 911 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 ETV4P43268 484 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 DNAJB13P59910 316 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 E2F2Q14209 437 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 IL11RAQ14626 422 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 RTP5Q14D33 572 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 ZNF678Q5SXM1 525 aa17.14■□□□□ 0.33
FAM239A-203ENST00000456563 CATSPEREQ5SY80 951 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms