RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 H0YJX3 145 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 TRIM38O00635 465 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 AXIN1O15169 862 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 B4GAT1O43505 415 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 LRP3O75074 770 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 BCAS2O75934 225 aaPredicted RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 SIX3O95343 332 aaPredicted RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 ESRRBO95718 433 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PCCBP05166 539 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 SMIM18P0DKX4 95 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 COX4I1P13073 169 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 ZNF26P17031 533 aaPredicted RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 BSGP35613 385 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 MAPK9P45984 424 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 AP1S2P56377 157 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PPP1CAP62136 330 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 RCAN2Q14206 197 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 USP10Q14694 798 aaKnown RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 SNCBQ16143 134 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 LGSNQ5TDP6 509 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 TMEM220Q6QAJ8 160 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 WDR74Q6RFH5 385 aaPredicted RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 PARGQ86W56 976 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 CALHM3Q86XJ0 350 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PGBD3Q8N328 593 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 FBXW8Q8N3Y1 598 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 DCBLD1Q8N8Z6 715 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 OR4C6Q8NH72 309 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 RP9Q8TA86 221 aaKnown RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 APOBEC4Q8WW27 367 aaKnown RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 RLN3Q8WXF3 142 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 METTL2AQ96IZ6 378 aaKnown RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 WDR92Q96MX6 357 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PELI2Q9HAT8 420 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PLSCR2Q9NRY7 297 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 TAS2R13Q9NYV9 303 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 ACSL6Q9UKU0 697 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 POMT2Q9UKY4 750 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PPIEQ9UNP9 301 aaKnown RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 L3MBTL1Q9Y468 752 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 SLCO1B7G3V0H7 640 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 TGFBR3LH3BV60 316 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 KPNA3O00505 521 aaPredicted RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 ACOX3O15254 700 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 LCMT2O60294 686 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 SMNDC1O75940 238 aaKnown RBP eCLIP4.76□□□□□ -1.65
RIF1-207ENST00000454583 SLC16A8O95907 504 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ZNF806P0C7X5 589 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 F3P13726 295 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ITGALP20701 1170 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 DGKAP23743 735 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PIK3R1P27986 724 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PPARGP37231 505 aaPredicted RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 KPNA2P52292 529 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 ST8SIA6P61647 398 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 CSNK1G2P78368 415 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 MGAT2Q10469 447 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PRKAA1Q13131 559 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 APOFQ13790 326 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 KPNB1Q14974 876 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 CLPPQ16740 277 aaPredicted RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 KIF19Q2TAC6 998 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 SULT1C3Q6IMI6 304 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 COX15Q7KZN9 410 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 TBC1D1Q86TI0 1168 aaPredicted RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 C11orf74Q86VG3 221 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PHACTR4Q8IZ21 702 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 GOLM1Q8NBJ4 401 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 SETD7Q8WTS6 366 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 CDKL2Q92772 493 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PBXIP1Q96AQ6 731 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 CLPTM1LQ96KA5 538 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 SPATA16Q9BXB7 569 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ACPTQ9BZG2 426 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 GPR63Q9BZJ6 419 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 BRF2Q9HAW0 419 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 S100A14Q9HCY8 104 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 GPATCH2Q9NW75 528 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 GEMIN8Q9NWZ8 242 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 TAAR2Q9P1P5 351 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 SUCOQ9UBS9 1254 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 PRPF19Q9UMS4 504 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 NDRG2Q9UN36 371 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 POMPQ9Y244 141 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 MRPS17Q9Y2R5 130 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 TMEM184BQ9Y519 407 aaPredicted RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 B4DXG7 233 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 E7EQ34 232 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 DENRO43583 198 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 CTSVO60911 334 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 POP7O75817 140 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 TGFB1P01137 390 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 EBLN1P0CF75 366 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 MSH3P20585 1137 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ATP6V1C1P21283 382 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 CD38P28907 300 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 BDKRB1P46663 353 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PTDSS1P48651 473 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 HTR6P50406 440 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 EEF1A2Q05639 463 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms