RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 DLSTP36957 453 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 SLC6A12P48065 614 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 ATP6V0D1P61421 351 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 DLG1Q12959 904 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 NAE1Q13564 534 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 BMPR2Q13873 1038 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 TCTE1Q5JU00 501 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 ARHGAP40Q5TG30 622 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 YOD1Q5VVQ6 348 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-205ENST00000454542 FRMPD2BQ6IN97 320 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 TRMT10CQ7L0Y3 403 aaKnown RBP13.57□□□□□ -0.24
HDAC4-205ENST00000454542 GSPT2Q8IYD1 628 aaKnown RBP13.57□□□□□ -0.24
HDAC4-205ENST00000454542 CENPLQ8N0S6 344 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-205ENST00000454542 ARHGEF39Q8N4T4 335 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 STARD8Q92502 1023 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 TTC9Q92623 222 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 PTERQ96BW5 349 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 HIST1H2AHQ96KK5 128 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 OR4K3Q96R72 315 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 PAFAH2Q99487 392 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 HIST1H2AJQ99878 128 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 DPH2Q9BQC3 489 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-205ENST00000454542 SELENOSQ9BQE4 189 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 H2AFJQ9BTM1 129 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 DHRS4Q9BTZ2 278 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 TRIM54Q9BYV2 358 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 ATG10Q9H0Y0 220 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 CTNNAL1Q9UBT7 734 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 ZNF180Q9UJW8 692 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 SMG1Q96Q15 3661 aaKnown RBP13.57□□□□□ -0.24
HDAC4-205ENST00000454542 MDC1Q14676 2089 aaKnown RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 ZNF891A8MT65 544 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 RIPK2O43353 540 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 SRPX2O60687 465 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 ONECUT2O95948 504 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 RECKO95980 971 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 ALDOAP04075 364 aaKnown RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 RAB40ALP0C0E4 278 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 FAM153BP0C7A2 387 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 ITGAXP20702 1163 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 HRH2P25021 359 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 GMPRP36959 345 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 HNMTP50135 292 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 TGFBIQ15582 683 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 OR4D1Q15615 310 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 PRTGQ2VWP7 1150 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 FAM153CQ494X1 144 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 CDKL4Q5MAI5 379 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 LCN10Q6JVE6 187 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 CAPN13Q6MZZ7 669 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 FBXO42Q6P3S6 717 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 ZNF655Q8N720 491 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 PDPRQ8NCN5 879 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 ABHD11Q8NFV4 315 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 DCAKDQ8WVC6 231 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 N4BP2L2Q92802 583 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 KIAA1191Q96A73 305 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 OR2A5Q96R48 311 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 RUFY1Q96T51 708 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 HAUS8Q9BT25 410 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 SARGQ9BW04 601 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 CHST8Q9H2A9 424 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 ANKZF1Q9H8Y5 726 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 SNX15Q9NRS6 342 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 IGSF5Q9NSI5 407 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 KCND3Q9UK17 655 aa13.56□□□□□ -0.24
HDAC4-205ENST00000454542 MRPS18BQ9Y676 258 aaKnown RBP13.56□□□□□ -0.24
HDAC4-205ENST00000454542 LOC105369274A0A096LPK9 316 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 LOC102723532A0A0G2JNH3 316 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 A0A0J9YVX5 310 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 CCDC189A1A4V9 331 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 PABPN1LA6NDY0 278 aaKnown RBP13.55□□□□□ -0.24
HDAC4-205ENST00000454542 HAT1O14929 419 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 GUCA1CO95843 209 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 ANXA5P08758 320 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 CCNYL3P0C7X3 344 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 NPPBP16860 134 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 GCAP28676 217 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 SERPINB8P50452 374 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 SERPINB9P50453 376 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 PMS2P54278 862 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 EMP3P54852 163 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 CSNK1G2P78368 415 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 RHDQ02161 417 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 CDC20Q12834 499 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 TSTA3Q13630 321 aaPredicted RBP13.55□□□□□ -0.24
HDAC4-205ENST00000454542 CSHL1Q14406 222 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 GRM7Q14831 915 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 PCSK4Q6UW60 755 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 C17orf64Q86WR6 236 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 OR4N4Q8N0Y3 316 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC4-205ENST00000454542 PYCR2Q96C36 320 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 RHBDF1Q96CC6 855 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 CLIP3Q96DZ5 547 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 MED8Q96G25 268 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 C10orf90Q96M02 699 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 ATOH8Q96SQ7 321 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms