RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ANKRD28O15084 1053 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 BCAT2O15382 392 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 YY2O15391 372 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 RGS14O43566 566 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ATP5HO75947 161 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ETHE1O95571 254 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 TBX6O95947 436 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 GIMD1P0DJR0 217 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ESRRAP11474 423 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CDH1P12830 882 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 COX4I1P13073 169 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CALB2P22676 271 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 LAMA1P25391 3075 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PRDX6P30041 224 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CTSKP43235 329 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ZFP36L2P47974 494 aaKnown RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 AFF3P51826 1226 aaKnown RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 DIO3P55073 304 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ERVK-8P63133 956 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CSNK1G2P78368 415 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 IRX1P78414 480 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 HMGCS1Q01581 520 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 EMX2Q04743 252 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PRDX1Q06830 199 aaKnown RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ACTN3Q08043 901 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 GRIK2Q13002 908 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 TSTA3Q13630 321 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 GPR18Q14330 331 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SLBPQ14493 270 aaKnown RBP eCLIP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 KRT33BQ14525 404 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SQLEQ14534 574 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 KIR2DS5Q14953 304 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 HERC3Q15034 1050 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SHBQ15464 509 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 GSTA3Q16772 222 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SMU1Q2TAY7 513 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 AP5B1Q2VPB7 878 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PLK5Q496M5 336 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 RFTN2Q52LD8 501 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SGO1Q5FBB7 561 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PRRT3Q5FWE3 981 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 LYSMD4Q5XG99 296 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ICE2Q659A1 982 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ADNP2Q6IQ32 1131 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 MED27Q6P2C8 311 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 OGFOD3Q6PK18 319 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 RINLQ6ZS11 566 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 VN1R5Q7Z5H4 357 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 TAF8Q7Z7C8 310 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 TMPRSS11BQ86T26 416 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 AMIGO1Q86WK6 493 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 C17orf64Q86WR6 236 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 C17orf82Q86X59 251 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ZFAND4Q86XD8 727 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 MYLK4Q86YV6 388 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 FUNDC1Q8IVP5 155 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 POU5F2Q8N7G0 328 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ZNF740Q8NDX6 193 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 OR4E2Q8NGC2 313 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 FBXO27Q8NI29 283 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 LMX1AQ8TE12 382 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SLC37A2Q8TED4 501 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SELENOMQ8WWX9 145 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CXorf40BQ96DE9 158 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 FAM122AQ96E09 287 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 C11orf24Q96F05 449 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ZC3H10Q96K80 434 aaKnown RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 FCRL1Q96LA6 429 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PPP3R2Q96LZ3 170 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 EFCAB11Q9BUY7 163 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ACAT2Q9BWD1 397 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 RAB11FIP5Q9BXF6 653 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 BRINP2Q9C0B6 783 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PCBD2Q9H0N5 130 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 NT5DC2Q9H857 520 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ACTR5Q9H9F9 607 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 ERVMER34-1Q9H9K5 563 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PELI2Q9HAT8 420 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SLC6A20Q9NP91 592 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SLC52A3Q9NQ40 469 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 SDR39U1Q9NRG7 319 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 TXLNGQ9NUQ3 528 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 POT1Q9NUX5 634 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 RIC8BQ9NVN3 520 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 AIG1Q9NVV5 245 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CUEDC1Q9NWM3 386 aaPredicted RBP5.78□□□□□ -1.48
SDC4P-201ENST00000453285 TAS2R1Q9NYW7 299 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CPNE7Q9UBL6 633 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 TAC3Q9UHF0 121 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 TAGLN3Q9UI15 199 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PILRBQ9UKJ0 227 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 FBXO4Q9UKT5 387 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PCDHB11Q9Y5F2 797 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 PCDHGA11Q9Y5H2 935 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 CAPN7Q9Y6W3 813 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 FER1L5A0AVI2 2057 aa5.78□□□□□ -1.48
SDC4P-201ENST00000453285 DNAH14Q0VDD8 3507 aa5.77□□□□□ -1.49
SDC4P-201ENST00000453285 MUC3AQ02505 3323 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms