RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GPR149Q86SP6 731 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 TBC1D21Q8IYX1 336 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 CLEC4FQ8N1N0 589 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 FAM47BQ8NA70 645 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 OR5AR1Q8NGP9 310 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 WDR20Q8TBZ3 569 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 ITCHQ96J02 903 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 HIC2Q96JB3 615 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 MYADMQ96S97 322 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 MYOCQ99972 504 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 OSBPL11Q9BXB4 747 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 PAIP1Q9H074 479 aaKnown RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 SERHLQ9NQF3 203 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 SLC23A2Q9UGH3 650 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 CDH7Q9ULB5 785 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 STON1Q9Y6Q2 735 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 A0A1W2PP55 124 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 ENO4A6NNW6 628 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 LILRB5O75023 590 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 OR6B1O95007 311 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 CLPTM1O96005 669 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 PAK4O96013 591 aaPredicted RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 ANXA4P09525 319 aaPredicted RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 IST1P53990 364 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 POLE2P56282 527 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 CHRNB3Q05901 458 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 SLC14A1Q13336 389 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 RBBP5Q15291 538 aaKnown RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 SPATS1Q496A3 300 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 CAPN13Q6MZZ7 669 aaPredicted RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 GALNT10Q86SR1 603 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 CLECL1Q8IZS7 167 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 TMEM132CQ8N3T6 1108 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 ZNF513Q8N8E2 541 aaPredicted RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 GRIP2Q9C0E4 1043 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 CARS2Q9HA77 564 aaKnown RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 MOSPD1Q9UJG1 213 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 FADS3Q9Y5Q0 445 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 GRXCR2A6NFK2 248 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 CCDC160A6NGH7 325 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 CXCR6O00574 342 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 TNFAIP8O95379 198 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 ABCB1P08183 1280 aaPredicted RBP11.38□□□□□ -0.59
VTA1-203ENST00000452973 SLBPQ14493 270 aaKnown RBP eCLIP11.38□□□□□ -0.59
VTA1-203ENST00000452973 ZIK1Q3SY52 487 aaPredicted RBP11.38□□□□□ -0.59
VTA1-203ENST00000452973 FAM98BQ52LJ0 330 aaKnown RBP11.38□□□□□ -0.59
VTA1-203ENST00000452973 AADATQ8N5Z0 425 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 ZNF740Q8NDX6 193 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 ZNF548Q8NEK5 533 aaPredicted RBP11.38□□□□□ -0.59
VTA1-203ENST00000452973 OR56A3Q8NH54 315 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 CSGALNACT1Q8TDX6 532 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 SH3GL1Q99961 368 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 C9orf16Q9BUW7 83 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 SLC6A17Q9H1V8 727 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 ASIC5Q9NY37 505 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 SH3BP4Q9P0V3 963 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 PCDHGA11Q9Y5H2 935 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 FPGTO14772 594 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 PRKD3O94806 890 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 MYO1DO94832 1006 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 UMPSP11172 480 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 LAMP1P11279 417 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 ETS2P15036 469 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 NPPBP16860 134 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 DRD3P35462 400 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 HNF4AP41235 474 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 CASP9P55211 416 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 LIN52Q52LA3 116 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 GRHL2Q6ISB3 625 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 SYCE2Q6PIF2 218 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 TBPL2Q6SJ96 375 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 RNF165Q6ZSG1 346 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 OFCC1Q8IZS5 231 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 HDDC3Q8N4P3 179 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 SH3KBP1Q96B97 665 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 KCNH6Q9H252 994 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 OR51B5Q9H339 312 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 OSGEPL1Q9H4B0 414 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 KAT8Q9H7Z6 458 aaKnown RBP11.38□□□□□ -0.59
VTA1-203ENST00000452973 THAP10Q9P2Z0 257 aaPredicted RBP11.38□□□□□ -0.59
VTA1-203ENST00000452973 BTBD3Q9Y2F9 522 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 TMED5Q9Y3A6 229 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 DYRK1BQ9Y463 629 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 GNGT2O14610 69 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 PAPLNO95428 1278 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 NTRK1P04629 796 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 POU2F2P09086 479 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 FCGR1AP12314 374 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 CDH1P12830 882 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 UGT8Q16880 541 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 PIP5KL1Q5T9C9 394 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 ANGPTL8Q6UXH0 198 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 PRR23BQ6ZRT6 265 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 CHST15Q7LFX5 561 aaPredicted RBP11.38□□□□□ -0.59
VTA1-203ENST00000452973 RASGRP3Q8IV61 690 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 CHERPQ8IWX8 916 aaKnown RBP11.38□□□□□ -0.59
VTA1-203ENST00000452973 OR9A1PQ8NGU1 263 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 NETO1Q8TDF5 533 aa11.38□□□□□ -0.59
VTA1-203ENST00000452973 SNX19Q92543 992 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms