RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 AP1G1O43747 822 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PRAMEF4O60810 478 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 TIPRLO75663 272 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PDYNP01213 254 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 GSTM1P09488 218 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ELFN1P0C7U0 828 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 HTR1EP28566 365 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 OXTRP30559 389 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 CTSCP53634 463 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 GSTM4Q03013 218 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PWP1Q13610 501 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 INPP5AQ14642 412 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 CPSF6Q16630 551 aaKnown RBP eCLIP10.39□□□□□ -0.75
PKP4-206ENST00000452162 IMPG1Q17R60 797 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PRAMEF9Q5VWM5 478 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 FAM46CQ5VWP2 391 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PMS2CLQ68D20 193 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 SUSD1Q6UWL2 747 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.39□□□□□ -0.75
PKP4-206ENST00000452162 USP30Q70CQ3 517 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 RAVER1Q8IY67 606 aaKnown RBP10.39□□□□□ -0.75
PKP4-206ENST00000452162 LIX1Q8N485 282 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ANKFN1Q8N957 763 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 MCOLN3Q8TDD5 553 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 EME1Q96AY2 570 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 FBXL8Q96CD0 374 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 COQ10AQ96MF6 247 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 GPR174Q9BXC1 333 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 Q9H521 79 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 DNAJC11Q9NVH1 559 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ZNHIT2Q9UHR6 403 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 AP4B1Q9Y6B7 739 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 CFAP54Q96N23 3096 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 TSPAN6O43657 245 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 NDUFS2O75306 463 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 SEC22BO75396 215 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 PSIP1O75475 530 aaKnown RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 BMP2P12643 396 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 PRPH2P23942 346 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 PRLHRP49683 370 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 PFN3P60673 137 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 ACOX1Q15067 660 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 PLA2G4EQ3MJ16 856 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 ARMCX6Q7L4S7 300 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 ASCL5Q7RTU5 278 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 AMIGO2Q86SJ2 522 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 IFNEQ86WN2 208 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 GALNT4Q8N4A0 578 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 GLB1L3Q8NCI6 653 aaPredicted RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 PHC3Q8NDX5 983 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 GLMNQ92990 594 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 PYCR2Q96C36 320 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 AP2M1Q96CW1 435 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 DTD2Q96FN9 168 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 ZNF597Q96LX8 424 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 ZBTB18Q99592 522 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 CGREF1Q99674 301 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 BTBD1Q9H0C5 482 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 CLMPQ9H6B4 373 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 COQ10BQ9H8M1 238 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 SNX6Q9UNH7 406 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 USP22Q9UPT9 525 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 NCKAP1Q9Y2A7 1128 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 SLC5A10A0PJK1 596 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 SERTM1A2A2V5 107 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 PABPN1LA6NDY0 278 aaKnown RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 ARHGEF33A8MVX0 844 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 NPIPB8E9PQR5 432 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 WNT9AO14904 365 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 HNRNPRO43390 633 aaKnown RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 GPIP06744 558 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 MTHFD1P11586 935 aaKnown RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 HRH2P25021 359 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 PSMA4P25789 261 aaKnown RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 ITGB7P26010 798 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 CHN2P52757 468 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 SELPLGQ14242 412 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 ZNF658BQ4V348 819 aaPredicted RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 TBCELQ5QJ74 424 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 AGBL4Q5VU57 503 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 CACHD1Q5VU97 1274 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 SLC36A4Q6YBV0 504 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 KLHDC8AQ8IYD2 350 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 SLC13A3Q8WWT9 602 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 MTFMTQ96DP5 389 aaKnown RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 PPM1MQ96MI6 270 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 WRAP53Q9BUR4 548 aaKnown RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 DPY30Q9C005 99 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 C6orf106Q9H6K1 298 aaPredicted RBP10.38□□□□□ -0.75
PKP4-206ENST00000452162 UBAP1Q9NZ09 502 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 RAB23Q9ULC3 237 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 FZD4Q9ULV1 537 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 SLC22A14Q9Y267 594 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 AK5Q9Y6K8 562 aa10.38□□□□□ -0.75
PKP4-206ENST00000452162 CACNA1EQ15878 2313 aa10.37□□□□□ -0.75
PKP4-206ENST00000452162 PRR23AA6NEV1 266 aa10.37□□□□□ -0.75
PKP4-206ENST00000452162 SEMA4FO95754 770 aa10.37□□□□□ -0.75
PKP4-206ENST00000452162 SOD1P00441 154 aa10.37□□□□□ -0.75
PKP4-206ENST00000452162 BCKDHAP12694 445 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms