RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 CIDEBQ9UHD4 219 aa15.32■□□□□ 0.04
SGCE-208ENST00000450385 RUVBL2Q9Y230 463 aaKnown RBP15.32■□□□□ 0.04
SGCE-208ENST00000450385 DOCK10Q96BY6 2186 aa15.32■□□□□ 0.04
SGCE-208ENST00000450385 COL12A1Q99715 3063 aa15.32■□□□□ 0.04
SGCE-208ENST00000450385 IGLV3-12A0A075B6K2 115 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 KCNE1BA0A087WTH5 132 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 AHSGP02765 367 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 CTSBP07858 339 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 UMODP07911 640 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 PSMB5P28074 263 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 DR1Q01658 176 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 DHX9Q08211 1270 aaKnown RBP15.31■□□□□ 0.04
SGCE-208ENST00000450385 UBE2R2Q712K3 238 aaPredicted RBP15.31■□□□□ 0.04
SGCE-208ENST00000450385 PAQR7Q86WK9 346 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 BBOF1Q8ND07 529 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 GIMAP7Q8NHV1 300 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 ANKRD7Q92527 254 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 PNPLA2Q96AD5 504 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 FAM136AQ96C01 138 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 SLC30A3Q99726 388 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 TRIM56Q9BRZ2 755 aaKnown RBP15.31■□□□□ 0.04
SGCE-208ENST00000450385 TMEM184CQ9NVA4 438 aa15.31■□□□□ 0.04
SGCE-208ENST00000450385 ZNF282Q9UDV7 671 aaPredicted RBP15.31■□□□□ 0.04
SGCE-208ENST00000450385 A0A0J9YVX5 310 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 TTLL8A6PVC2 850 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 H0YGG7 62 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 PDGFAP04085 211 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 CYC1P08574 325 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 HIST1H2AGP0C0S8 130 aaPredicted RBP15.3■□□□□ 0.04
SGCE-208ENST00000450385 HIST1H2ADP20671 130 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 AP1S2P56377 157 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 ARL4CP56559 192 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 IL2P60568 153 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 ARF3P61204 181 aaPredicted RBP15.3■□□□□ 0.04
SGCE-208ENST00000450385 CHAF1BQ13112 559 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 SLC9A5Q14940 896 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 NDUFA9Q16795 377 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 FRMPD2BQ6IN97 320 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 HIBCHQ6NVY1 386 aaPredicted RBP15.3■□□□□ 0.04
SGCE-208ENST00000450385 PPP1R32Q7Z5V6 425 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 LRRC56Q8IYG6 542 aaPredicted RBP15.3■□□□□ 0.04
SGCE-208ENST00000450385 EFCAB3Q8N7B9 438 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 GALNT11Q8NCW6 608 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 CERS2Q96G23 380 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 PDLIM5Q96HC4 596 aaKnown RBP15.3■□□□□ 0.04
SGCE-208ENST00000450385 HIST1H2AHQ96KK5 128 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 OR2A5Q96R48 311 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 SPSB2Q99619 263 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 HIST1H2AJQ99878 128 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 H2AFJQ9BTM1 129 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 NUDT9Q9BW91 350 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 TRIM54Q9BYV2 358 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 TGIF2Q9GZN2 237 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 TEX264Q9Y6I9 313 aa15.3■□□□□ 0.04
SGCE-208ENST00000450385 CNTRLQ7Z7A1 2325 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 LOC105369274A0A096LPK9 316 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 LOC102723532A0A0G2JNH3 316 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 CNOT3O75175 753 aaKnown RBP15.29■□□□□ 0.04
SGCE-208ENST00000450385 SORBS2O94875 1100 aaKnown RBP15.29■□□□□ 0.04
SGCE-208ENST00000450385 NR1D1P20393 614 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 RPS15AP62244 130 aaKnown RBP15.29■□□□□ 0.04
SGCE-208ENST00000450385 AP2B1P63010 937 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 DSG2Q14126 1118 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 HIF1AQ16665 826 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 TEDDM1Q5T9Z0 273 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 THEMIS2Q5TEJ8 643 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 IRAK1BP1Q5VVH5 260 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 STEAP4Q687X5 459 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 JMJD6Q6NYC1 403 aaPredicted RBP15.29■□□□□ 0.04
SGCE-208ENST00000450385 SUSD1Q6UWL2 747 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 COX15Q7KZN9 410 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 OR4N4Q8N0Y3 316 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 MYO1HQ8N1T3 1032 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 CPT1CQ8TCG5 803 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 EEF1AKMT1Q8WVE0 214 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 ATL1Q8WXF7 558 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 COL26A1Q96A83 441 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 SNF8Q96H20 258 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 ACAT2Q9BWD1 397 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 SLC6A20Q9NP91 592 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 SLAMF7Q9NQ25 335 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 CCDC177Q9NQR7 707 aaPredicted RBP15.29■□□□□ 0.04
SGCE-208ENST00000450385 C14orf105Q9NVL8 296 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 NSMCE4AQ9NXX6 385 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 TAC3Q9UHF0 121 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 CDC23Q9UJX2 597 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 VWA7Q9Y334 891 aa15.29■□□□□ 0.04
SGCE-208ENST00000450385 IGKV1-8A0A0C4DH67 115 aa15.28■□□□□ 0.04
SGCE-208ENST00000450385 A0A1W2PQ72 361 aa15.28■□□□□ 0.04
SGCE-208ENST00000450385 CLEC18AA5D8T8 446 aa15.28■□□□□ 0.04
SGCE-208ENST00000450385 PABPN1LA6NDY0 278 aaKnown RBP15.28■□□□□ 0.04
SGCE-208ENST00000450385 VPS4BO75351 444 aa15.28■□□□□ 0.04
SGCE-208ENST00000450385 SEC31AO94979 1220 aaKnown RBP15.28■□□□□ 0.04
SGCE-208ENST00000450385 SYF2O95926 243 aaKnown RBP15.28■□□□□ 0.04
SGCE-208ENST00000450385 EIF2S1P05198 315 aaKnown RBP15.28■□□□□ 0.04
SGCE-208ENST00000450385 ENO2P09104 434 aaPredicted RBP15.28■□□□□ 0.04
SGCE-208ENST00000450385 ZGLP1P0C6A0 271 aa15.28■□□□□ 0.04
SGCE-208ENST00000450385 FDXRP22570 491 aa15.28■□□□□ 0.04
SGCE-208ENST00000450385 MCM3P25205 808 aa15.28■□□□□ 0.04
SGCE-208ENST00000450385 IMPA1P29218 277 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms