RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DCBLD1Q8N8Z6 715 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ATG16L2Q8NAA4 619 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GLIS1Q8NBF1 620 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC37A3Q8NCC5 494 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TMEM35BQ8NCS4 154 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 NAXEQ8NCW5 288 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZMIZ2Q8NF64 920 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 IPMKQ8NFU5 416 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 FBXO30Q8TB52 745 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PDCD6IPQ8WUM4 868 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF480Q8WV37 535 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ASZ1Q8WWH4 475 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 AKAP1Q92667 903 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 P2RX5Q93086 422 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CPNE4Q96A23 557 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRIM43Q96BQ3 446 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PGAP3Q96FM1 320 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SNX22Q96L94 193 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 C9orf72Q96LT7 481 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GLT1D1Q96MS3 346 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TEPSINQ96N21 525 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF558Q96NG5 402 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CASD1Q96PB1 797 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PPP1R2P1Q96PQ5 205 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PKP2Q99959 881 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SYT3Q9BQG1 590 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 RTKNQ9BST9 563 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CCDC32Q9BV29 185 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 C1orf43Q9BWL3 253 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PAPOLGQ9BWT3 736 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TSSK1BQ9BXA7 367 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 REG4Q9BYZ8 158 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GPR61Q9BZJ8 451 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 RACGAP1Q9H0H5 632 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 DNTTIP1Q9H147 329 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 C2orf40Q9H1Z8 148 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GANQ9H2C0 597 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HEXA-AS1Q9H8Q6 139 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 LRRC40Q9H9A6 602 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 POLR1BQ9H9Y6 1135 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 OBP2BQ9NPH6 170 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TLR9Q9NR96 1032 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SIDT1Q9NXL6 827 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 BABAM2Q9NXR7 383 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PTTG3PQ9NZH4 202 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CCDC59Q9P031 241 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 MORF4L1Q9UBU8 362 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 NDRG3Q9UGV2 375 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLCO3A1Q9UIG8 710 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 OSGIN1Q9UJX0 560 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 AMFRQ9UKV5 643 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC39A10Q9ULF5 831 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SCML1Q9UN30 329 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PACSIN2Q9UNF0 486 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 KCNJ14Q9UNX9 436 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CDY1Q9Y6F8 540 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SIPA1L3O60292 1781 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 RGPD2P0DJD1 1756 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ALS2Q96Q42 1657 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 ROBO3Q96MS0 1386 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 TMEM2Q9UHN6 1383 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 SPATA31A6Q5VVP1 1343 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 A0A0G2JND7 137 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 A6NCN8 305 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 OR14I1A6ND48 311 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 TRIM49BA6NDI0 452 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 RRN3P2A6NIE6 340 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 SAC3D1A6NKF1 404 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 CLCA1A8K7I4 914 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 PDZK1P1A8MUH7 402 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 A8MXK9 166 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 FOXO6A8MYZ6 492 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 KRBOX1C9JBD0 128 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 DNASE2O00115 360 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 ACKR2O00590 384 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 STX16O14662 325 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 ANGPT2O15123 496 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 CASC3O15234 703 aaKnown RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 AKAP8O43823 692 aaKnown RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 SELENOFO60613 162 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 USP12O75317 370 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 GPR32O75388 356 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 CRTAPO75718 401 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 CDC123O75794 336 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 PIAS1O75925 651 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 KLHL18O94889 574 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 MATN4O95460 622 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 PEX11BO96011 259 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 PLGP00747 810 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 GASTP01350 101 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 MT-ND5P03915 603 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 PRKCBP05771 671 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 ENO1P06733 434 aaKnown RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 ANXA2P07355 339 aaKnown RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 GALTP07902 379 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 HOXC4P09017 264 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 RBP1P09455 135 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 ARP10275 920 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 MCF2P10911 925 aa3.52□□□□□ -1.85
HMGB3P8-201ENST00000449709 FCGR1AP12314 374 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms