RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 DCTN4Q9UJW0 460 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 TSC22D4Q9Y3Q8 395 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 WDR87Q6ZQQ6 2873 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 A0A0G2JND7 137 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 OR6C74A6NCV1 312 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 TRIM38O00635 465 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 CRCPO75575 148 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 PNLIPP16233 465 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 ARL1P40616 181 aaPredicted RBP18.56■□□□□ 0.56
RPS28-202ENST00000449223 BTKQ06187 659 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 LAPTM5Q13571 262 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 XKR7Q5GH72 579 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 PAGE2BQ5JRK9 111 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 CATSPEREQ5SY80 951 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 OOSP2Q86WS3 158 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 LAS2Q8IYD9 372 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 MINDY1Q8N5J2 469 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 JPH3Q8WXH2 748 aaPredicted RBP18.56■□□□□ 0.56
RPS28-202ENST00000449223 C19orf60Q96EN9 201 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 SEC16BQ96JE7 1060 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 SARGQ9BW04 601 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 ACAT2Q9BWD1 397 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 TBC1D10AQ9BXI6 508 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 TMEM120AQ9BXJ8 343 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 RAB33BQ9H082 229 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 TUBB1Q9H4B7 451 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 EPB41L1Q9H4G0 881 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 PFDN4Q9NQP4 134 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 GMEB2Q9UKD1 530 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 SNX6Q9UNH7 406 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 ARL2BPQ9Y2Y0 163 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 TIMM22Q9Y584 194 aa18.56■□□□□ 0.56
RPS28-202ENST00000449223 IGKV1-8A0A0C4DH67 115 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 LNP1A1A4G5 178 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 C2orf74A8MZ97 194 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 UBXN7O94888 489 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 KRT6AP02538 564 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 KRT6BP04259 564 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 CDH1P12830 882 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 HMOX2P30519 316 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 CAPZBP47756 277 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 KRT6CP48668 564 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 IDH3AP50213 366 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 ARFIP2P53365 341 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 SLC5A12Q1EHB4 618 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 TCEAL6Q6IPX3 200 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 WDR20Q8TBZ3 569 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 TCEAL3Q969E4 200 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 THOC1Q96FV9 657 aaKnown RBP18.55■□□□□ 0.56
RPS28-202ENST00000449223 OR2A14Q96R47 310 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 SLC38A3Q99624 504 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 PLCD4Q9BRC7 762 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 NUF2Q9BZD4 464 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 SMOC1Q9H4F8 434 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 ABCF3Q9NUQ8 709 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 GEMIN8Q9NWZ8 242 aaKnown RBP18.55■□□□□ 0.56
RPS28-202ENST00000449223 ACTR10Q9NZ32 417 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 LRIT1Q9P2V4 623 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 APOBEC2Q9Y235 224 aaKnown RBP18.55■□□□□ 0.56
RPS28-202ENST00000449223 PCDHGA11Q9Y5H2 935 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 RNF215Q9Y6U7 377 aa18.55■□□□□ 0.56
RPS28-202ENST00000449223 COL5A1P20908 1838 aaPredicted RBP18.55■□□□□ 0.56
RPS28-202ENST00000449223 LY6G6EA0A0G2JKS1 128 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 SDHDO14521 159 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 TNFSF14O43557 240 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 LRP3O75074 770 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 UGT2B7P16662 529 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 CXCR2P25025 360 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 SERPINB3P29508 390 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 CMPK1P30085 196 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 NBL1P41271 181 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 CCR8P51685 355 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 YBX1P67809 324 aaKnown RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 NAA25Q14CX7 972 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 ZRSR2Q15696 482 aaKnown RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 CCDC6Q16204 474 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 PDCD2Q16342 344 aaPredicted RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 CPSF6Q16630 551 aaKnown RBP eCLIP18.54■□□□□ 0.56
RPS28-202ENST00000449223 VWA5B1Q5TIE3 1220 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 FRG2Q64ET8 278 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 ZNF425Q6IV72 752 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 TRIM46Q7Z4K8 759 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 CCDC197Q8NCU1 140 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 OR2I1PQ8NGU4 316 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 ACTRT2Q8TDY3 377 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 UBE2E3Q969T4 207 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 FRG2BQ96QU4 278 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 EBF4Q9BQW3 602 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 NT5DC2Q9H857 520 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 MRPS30Q9NP92 439 aaKnown RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 TMEM184CQ9NVA4 438 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 CUEDC1Q9NWM3 386 aaPredicted RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 HRASLS2Q9NWW9 162 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 ANKMY1Q9P2S6 941 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 EPHA6Q9UF33 1036 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 PPT2Q9UMR5 302 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 FIS1Q9Y3D6 152 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 U3KQA8 63 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 OTOGLQ3ZCN5 2332 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 RHPN2P1A8MT19 583 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms