RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TOMM20Q15388 145 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 PFKFB4Q16877 469 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.46□□□□□ -0.74
LINC00342-202ENST00000448494 PIWIL4Q7Z3Z4 852 aaKnown RBP10.46□□□□□ -0.74
LINC00342-202ENST00000448494 ZER1Q7Z7L7 766 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 PAQR7Q86WK9 346 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 PSTKQ8IV42 348 aaKnown RBP10.46□□□□□ -0.74
LINC00342-202ENST00000448494 LNX2Q8N448 690 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 TMEM151AQ8N4L1 468 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 OR5K1Q8NHB7 308 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 CPNE4Q96A23 557 aaPredicted RBP10.46□□□□□ -0.74
LINC00342-202ENST00000448494 CPB2Q96IY4 423 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 CYP2S1Q96SQ9 504 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 NT5DC2Q9H857 520 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 OLA1Q9NTK5 396 aaKnown RBP10.46□□□□□ -0.74
LINC00342-202ENST00000448494 SEC14L4Q9UDX3 406 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 BTNL2Q9UIR0 455 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 SAMHD1Q9Y3Z3 626 aaKnown RBP10.46□□□□□ -0.74
LINC00342-202ENST00000448494 CMAHPQ9Y471 501 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 DMRT1Q9Y5R6 373 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 PTPRJQ12913 1337 aa10.46□□□□□ -0.74
LINC00342-202ENST00000448494 GLYATL1P3A0A0U1RQE8 302 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 CA12O43570 354 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 RBBP9O75884 186 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 RECQL5O94762 991 aaPredicted RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 ANXA3P12429 323 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 CKMT1AP12532 417 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 ACADLP28330 430 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 GABREP78334 506 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 DEFA6Q01524 100 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 GBX1Q14549 363 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 VEPH1Q14D04 833 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 MPEG1Q2M385 716 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 KLHL26Q53HC5 615 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 ODR4Q5SWX8 454 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 LAIR1Q6GTX8 287 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 TMEM107Q6UX40 140 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 FAM131AQ6UXB0 335 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 RNF113BQ8IZP6 322 aaKnown RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 LPCAT1Q8NF37 534 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 OR11H4Q8NGC9 324 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 STYXQ8WUJ0 223 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 CREB3L1Q96BA8 519 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 COA7Q96BR5 231 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 MRGPRX2Q96LB1 330 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 SENP8Q96LD8 212 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 CHCHD6Q9BRQ6 235 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 MRPL4Q9BYD3 311 aaKnown RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 GSDMCQ9BYG8 508 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 RNF167Q9H6Y7 350 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 ZNF334Q9HCZ1 680 aaPredicted RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 PRMT8Q9NR22 394 aaPredicted RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 HSPBP1Q9NZL4 362 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 NDUFAF4Q9P032 175 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 A0A1B0GV90 55 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 FAM240BA0A1B0GVZ2 78 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 WDR27A2RRH5 827 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 USP17L3A6NCW0 530 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 USP17L4A6NCW7 530 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 M0R233 179 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 VEGFDO43915 354 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 PRKRAO75569 313 aaKnown RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 C9P02748 559 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 TSPAN8P19075 237 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 SDC4P31431 198 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 RGS6P49758 472 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 BCAMP50895 628 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 IRF9Q00978 393 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 MAD2L1BPQ15013 274 aaPredicted RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 RNF212Q495C1 297 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 NOMO2Q5JPE7 1267 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 AADACL4Q5VUY2 407 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 SSX9Q7RTT3 188 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 USP17L1Q7RTZ2 530 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 TSPEARQ8WU66 669 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 UPRTQ96BW1 309 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 MTERF3Q96E29 417 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 MOCOSQ96EN8 888 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 COQ10AQ96MF6 247 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 CSPG4P5Q96PW8 444 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 CEP41Q9BYV8 373 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 NKX6-2Q9C056 277 aaPredicted RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 MED28Q9H204 178 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 DHX35Q9H5Z1 703 aaKnown RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 TDRD3Q9H7E2 651 aaKnown RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 SEBOXQ9HB31 216 aaPredicted RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 GTSE1Q9NYZ3 720 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 HCN3Q9P1Z3 774 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 HCN2Q9UL51 889 aa10.45□□□□□ -0.74
LINC00342-202ENST00000448494 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
LINC00342-202ENST00000448494 IQCMA0A1B0GVH7 501 aa10.44□□□□□ -0.74
LINC00342-202ENST00000448494 BCLAF3A2AJT9 711 aaKnown RBP10.44□□□□□ -0.74
LINC00342-202ENST00000448494 SPATA31C2B4DYI2 1134 aa10.44□□□□□ -0.74
LINC00342-202ENST00000448494 QSOX1O00391 747 aa10.44□□□□□ -0.74
LINC00342-202ENST00000448494 LILRB5O75023 590 aa10.44□□□□□ -0.74
LINC00342-202ENST00000448494 SEC22BO75396 215 aa10.44□□□□□ -0.74
LINC00342-202ENST00000448494 POMCP01189 267 aa10.44□□□□□ -0.74
LINC00342-202ENST00000448494 APOC3P02656 99 aa10.44□□□□□ -0.74
LINC00342-202ENST00000448494 SBK3P0C264 359 aa10.44□□□□□ -0.74
LINC00342-202ENST00000448494 ZDHHC11BP0C7U3 371 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms