RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 AGTRAPQ6RW13 159 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 CHERPQ8IWX8 916 aaKnown RBP16.18■□□□□ 0.18
TCOF1-206ENST00000445265 KRTCAP2Q8N6L1 136 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 TRUB1Q8WWH5 349 aaKnown RBP16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ZBED6CLQ96FA7 236 aaPredicted RBP16.18■□□□□ 0.18
TCOF1-206ENST00000445265 R3HDMLQ9H3Y0 253 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 SPATA7Q9P0W8 599 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 PRSS56P0CW18 603 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 GSTM2P28161 218 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 HTR6P50406 440 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 PMS2P3Q13401 168 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 VMACQ2NL98 169 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 SMU1Q2TAY7 513 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 PLA2G4EQ3MJ16 856 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ZFP69Q49AA0 526 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 KLHL35Q6PF15 583 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 COL21A1Q96P44 957 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ATOH8Q96SQ7 321 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 RIOK2Q9BVS4 552 aaKnown RBP16.18■□□□□ 0.18
TCOF1-206ENST00000445265 SLC7A5P2Q9GIP4 190 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 POLR2J3Q9H1A7 115 aaKnown RBP16.18■□□□□ 0.18
TCOF1-206ENST00000445265 MOV10Q9HCE1 1003 aaKnown RBP16.18■□□□□ 0.18
TCOF1-206ENST00000445265 C11orf16Q9NQ32 467 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 GPR45Q9Y5Y3 372 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF840PA6NDX5 716 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 PDPK1O15530 556 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 CHST10O43529 356 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 DYRK3O43781 588 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 AP2A2O94973 939 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ITGB1P05556 798 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 GALTP07902 379 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ACRV1P26436 265 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 CENPAP49450 140 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 CAP1Q01518 475 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 RGS1Q08116 209 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 GRM2Q14416 872 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF404Q494X3 552 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 COLEC12Q5KU26 742 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF730Q6ZMV8 503 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 CCDC80Q76M96 950 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 GALNT13Q8IUC8 556 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ALDH16A1Q8IZ83 802 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF671Q8TAW3 534 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 CD99L2Q8TCZ2 262 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 SH3RF2Q8TEC5 729 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 PCBD2Q9H0N5 130 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 MAN2B2Q9Y2E5 1009 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 ISM1B1AKI9 464 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 M0QX08 132 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 FBP2O00757 339 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 XPNPEP2O43895 674 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 TNFRSF21O75509 655 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 STC2O76061 302 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 OPN1SWP03999 348 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 ACADMP11310 421 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 SDC2P34741 201 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 GJA5P36382 358 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CLDN8P56748 225 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CDK6Q00534 326 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 HSPB3Q12988 150 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CARTPTQ16568 116 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 TYSND1Q2T9J0 566 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 MORN1Q5T089 497 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF544Q6NX49 715 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 C22orf39Q6P5X5 142 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 TRIM74Q86UV6 250 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 TRIM73Q86UV7 250 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 LILRA2Q8N149 483 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF655Q8N720 491 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 MAPKAP1Q9BPZ7 522 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 MYADML2A6NDP7 307 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 FKTNO75072 461 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CHRM1P11229 460 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CCND3P30281 292 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 NFATC3Q12968 1075 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 DEFB115Q30KQ5 88 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 TRPV1Q8NER1 839 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CLEC4MQ9H2X3 399 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 IMP3Q9NV31 184 aaKnown RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 PHIPQ8WWQ0 1821 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 DRGXA6NNA5 263 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 MYL9P24844 172 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 VIPR1P32241 457 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 KDELR2P33947 212 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 RPL34P49207 117 aaKnown RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 SKP1P63208 163 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CYBRD1Q53TN4 286 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 USP30Q70CQ3 517 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 TMEM102Q8N9M5 508 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-206ENST00000445265 ARRDC2Q8TBH0 407 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CD200R1Q8TD46 325 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 ADAMTS15Q8TE58 950 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CCM2Q9BSQ5 444 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CNPPD1Q9BV87 410 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 CEPT1Q9Y6K0 416 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 SERPINI2O75830 405 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 PRG2P13727 222 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 HNF1BP35680 557 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 DSTNP60981 165 aa16.17■□□□□ 0.18
TCOF1-206ENST00000445265 LAPTM4AQ15012 233 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms