RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PAPOLBQ9NRJ5 636 aaKnown RBP10.27□□□□□ -0.76
CALD1-210ENST00000443197 CHCHD3Q9NX63 227 aaKnown RBP10.27□□□□□ -0.76
CALD1-210ENST00000443197 GULP1Q9UBP9 304 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 C3orf18Q9UK00 162 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 PSME2Q9UL46 239 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 CDH7Q9ULB5 785 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 ARHGEF33A8MVX0 844 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 HTRA2O43464 458 aaPredicted RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 SLC28A2O43868 658 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 ALPPL2P10696 532 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 GJA4P35212 333 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 IL12RB1P42701 662 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 CLK1P49759 484 aaKnown RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 SPIBQ01892 262 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 TRAP1Q12931 704 aaKnown RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 TUBB3Q13509 450 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 USP39Q53GS9 565 aaKnown RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 INTS11Q5TA45 600 aaKnown RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 C16orf87Q6PH81 154 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 SBSNQ6UWP8 590 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 DEF8Q6ZN54 512 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 RBM44Q6ZP01 1051 aaKnown RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 TRAPPC9Q96Q05 1148 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 ACTR3BQ9P1U1 418 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 DNAH12Q6ZR08 3092 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 LRRC72A6NJI9 287 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 PRRT4C9JH25 899 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 TNNI3P19429 210 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 RPS3P23396 243 aaKnown RBP eCLIP10.27□□□□□ -0.77
CALD1-210ENST00000443197 PON2Q15165 354 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 PCBP2Q15366 365 aaKnown RBP eCLIP10.27□□□□□ -0.771e-7■□□□□ 10.9
CALD1-210ENST00000443197 PDCD4Q53EL6 469 aaKnown RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 RETREG3Q86VR2 466 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 OR5AR1Q8NGP9 310 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 SLC5A11Q8WWX8 675 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 PKP4Q99569 1192 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 SMAD5Q99717 465 aaKnown RBP10.27□□□□□ -0.77
CALD1-210ENST00000443197 SRMSQ9H3Y6 488 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 SOHLH2Q9NX45 425 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 TESMINQ9Y4I5 508 aa10.27□□□□□ -0.77
CALD1-210ENST00000443197 FEZF1A0PJY2 475 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 BUD31P41223 144 aaPredicted RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 EEFSECP57772 596 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 OCA2Q04671 838 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 CYP27C1Q4G0S4 372 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ATAD3BQ5T9A4 648 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ABRAXAS1Q6UWZ7 409 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ZDHHC21Q8IVQ6 265 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ZNF483Q8TF39 744 aaPredicted RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 MPP4Q96JB8 637 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 DACH2Q96NX9 599 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 TUBB1Q9H4B7 451 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 PDP1Q9P0J1 537 aaPredicted RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 DLGAP4Q9Y2H0 992 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 AP3M1Q9Y2T2 418 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 WDR81Q562E7 1941 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 A0A087WXM4 84 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 A0A1W2PRB8 838 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 TMEM202A6NGA9 273 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 AQP12BA6NM10 295 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 M0R3G1 203 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 FBP2O00757 339 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ZNF195O14628 629 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 TPST2O60704 377 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 FAM20BO75063 409 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ERN1O75460 977 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 ADARP55265 1226 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 CDH15P55291 814 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ACVR1Q04771 509 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 TTC23Q5W5X9 447 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 Q6ZNB5 142 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ADIPOR2Q86V24 386 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 TICAM1Q8IUC6 712 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 AQP12AQ8IXF9 295 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 FAM20CQ8IXL6 584 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 HUS1BQ8NHY5 278 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 HM13Q8TCT9 377 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 PHF10Q8WUB8 498 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 ADI1Q9BV57 179 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 PBX4Q9BYU1 374 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 MRPS30Q9NP92 439 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 SMPD3Q9NY59 655 aaPredicted RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 STOX2Q9P2F5 926 aaPredicted RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 ATXN10Q9UBB4 475 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 TRPS1Q9UHF7 1281 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 FZD4Q9ULV1 537 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 SAMD4AQ9UPU9 718 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 GMPPBQ9Y5P6 360 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 ERI3O43414 337 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 KRT75O95678 551 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 BMP1P13497 986 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 AOAHP28039 575 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 RPL5P46777 297 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 ANXA11P50995 505 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 DGKEP52429 567 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 LSM3P62310 102 aaKnown RBP10.26□□□□□ -0.77
CALD1-210ENST00000443197 GALNT7Q86SF2 657 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 TMC8Q8IU68 726 aa10.26□□□□□ -0.77
CALD1-210ENST00000443197 C11orf65Q8NCR3 313 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms