RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SUV39H1O43463 412 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 CYP17A1P05093 508 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 PGRP06401 933 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 SKP1P63208 163 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 PTGR1Q14914 329 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 GRIN2CQ14957 1233 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 HKDC1Q2TB90 917 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 TTC23Q5W5X9 447 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 RTL10Q7L3V2 364 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 CLEC14AQ86T13 490 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC47A1Q96FL8 570 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 TMEM74Q96NL1 305 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 DUSP26Q9BV47 211 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 OSBPL11Q9BXB4 747 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 PCBD2Q9H0N5 130 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 GDE1Q9NZC3 331 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 HS3ST2Q9Y278 367 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 IGLON5A6NGN9 336 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 FAM220BPB1ANY3 271 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 WASH3PC4AMC7 463 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 TAF4O00268 1085 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 MMP2P08253 660 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 PCSK2P16519 638 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 CMPK1P30085 196 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 AKT2P31751 481 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 GSK3BP49841 420 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 GALNT1Q10472 559 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 DPY19L1Q2PZI1 675 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 GALNT18Q6P9A2 607 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 BHLHB9Q6PI77 547 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 UBXN10Q96LJ8 280 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 CPEB1Q9BZB8 566 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 USE1Q9NZ43 259 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 MAGEB17A8MXT2 336 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CBX3Q13185 183 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZNF234Q14588 700 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 RGS21Q2M5E4 152 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 OR4F3Q6IEY1 312 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 TMEM214Q6NUQ4 689 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 HSD11B1LQ7Z5J1 315 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SIX5Q8N196 739 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 OR9A1PQ8NGU1 263 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 NSMCE3Q96MG7 304 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 BTBD1Q9H0C5 482 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CLK4Q9HAZ1 481 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 H2AFY2Q9P0M6 372 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 RAPGEFL1Q9UHV5 662 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CLEC4EQ9ULY5 219 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SHROOM3Q8TF72 1996 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 TFECO14948 347 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 AXIN1O15169 862 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 KMOO15229 486 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 DYRK3O43781 588 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 ADRB3P13945 408 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 HPGDP15428 266 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 FUT4P22083 530 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 HTR6P50406 440 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 RUNX1T1Q06455 604 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 ADGRE1Q14246 886 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 HNRNPA1L2Q32P51 320 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 C9orf64Q5T6V5 341 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 AFMIDQ63HM1 303 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 MACC1Q6ZN28 852 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 GALNT5Q7Z7M9 940 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 POC5Q8NA72 575 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SRFBP1Q8NEF9 429 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SMPDL3AQ92484 453 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 RBM38Q9H0Z9 239 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SOX17Q9H6I2 414 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 PLGRKTQ9HBL7 147 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 RIMS3Q9UJD0 308 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 PLAGL1Q9UM63 463 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SAMD4AQ9UPU9 718 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 MAP4K5Q9Y4K4 846 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 H3BN98 237 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 H3BQ06 376 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 MID1O15344 667 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 ERN1O75460 977 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 PENKP01210 267 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 PIM1P11309 404 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CDH3P22223 829 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 RXRGP48443 463 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CSNK1DP48730 415 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 BNIP3Q12983 259 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SIM2Q14190 667 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 HEPACAMQ14CZ8 416 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 DUS1LQ6P1R4 473 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 GPR65Q8IYL9 337 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 C8orf59Q8N0T1 100 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 UBASH3BQ8TF42 649 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 XAGE5Q8WWM1 108 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 USP7Q93009 1102 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 ATOH8Q96SQ7 321 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CFHR5Q9BXR6 569 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 OR51B5Q9H339 312 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SRMSQ9H3Y6 488 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CXorf21Q9HAI6 301 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms