RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 C11orf16Q9NQ32 467 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 NECTIN3Q9NQS3 549 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 VPS51Q9UID3 782 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF232Q9UNY5 417 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 IRGMA1A4Y4 181 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CARNS1A5YM72 827 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ACOX3O15254 700 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 BCAS1O75363 584 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MTX2O75431 263 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 GJB5O95377 273 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 GSRP00390 522 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 C1QAP02745 245 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ITGB1P05556 798 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 C4BPBP20851 252 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 FEN1P39748 380 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CDKN1CP49918 316 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 VASPP50552 380 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ACLYP53396 1101 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CLDN8P56748 225 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 BNC1Q01954 994 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 RELAQ04206 551 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 NOXRED1Q6NXP6 359 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 DNAJB7Q7Z6W7 309 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MRPL10Q7Z7H8 261 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 LAPTM4BQ86VI4 370 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PIANPQ8IYJ0 282 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CFAP206Q8IYR0 622 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CD200R1Q8TD46 325 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 USP7Q93009 1102 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SLC38A4Q969I6 547 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PPP1R16AQ96I34 528 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 AIF1LQ9BQI0 150 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MGME1Q9BQP7 344 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 POLR2J2Q9GZM3 115 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SNTG1Q9NSN8 517 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PAK1IP1Q9NWT1 392 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 VAPAQ9P0L0 249 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 YIPF1Q9Y548 306 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 HEMK1Q9Y5R4 338 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 A0A1W2PRB8 838 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ARNTLO00327 626 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 UBFD1O14562 309 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 AP3D1O14617 1153 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SLC30A4O14863 429 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ZW10O43264 779 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SNX4O95219 450 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 FGBP02675 491 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 RETP07949 1114 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ARNTP27540 789 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 HMGCLP35914 325 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SSR2P43308 183 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SLC15A1P46059 708 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SLC11A1P49279 550 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MAPK12P53778 367 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 RPP38P78345 283 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CYP4F8P98187 520 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 GANABQ14697 944 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CYBRD1Q53TN4 286 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 XKR4Q5GH76 650 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 OTUD1Q5VV17 481 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 TMEM220Q6QAJ8 160 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 USP30Q70CQ3 517 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 C16orf62Q7Z3J2 963 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PHYKPLQ8IUZ5 450 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SPARTQ8N0X7 666 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CLIP4Q8N3C7 705 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 FRS2Q8WU20 508 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 RASSF5Q8WWW0 418 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 GEMIN6Q8WXD5 167 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MRPL48Q96GC5 212 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 IL4I1Q96RQ9 567 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 TRIB3Q96RU7 358 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SLC35A5Q9BS91 424 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ABCB9Q9NP78 766 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CCDC177Q9NQR7 707 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ABCB8Q9NUT2 735 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 NME7Q9Y5B8 376 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 COL5A3P25940 1745 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PRMT3O60678 531 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 EFCAB14O75071 495 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 NME6O75414 186 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PDYNP01213 254 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 OPRL1P41146 370 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 OR2B6P58173 313 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 IRF5Q13568 498 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CLCA4Q14CN2 919 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 C18orf21Q32NC0 220 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 GTDC1Q4AE62 458 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SPIN4Q56A73 249 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 TUBA3EQ6PEY2 450 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SPRED1Q7Z699 444 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF598Q86UK7 904 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CACUL1Q86Y37 369 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 NPAS3Q8IXF0 933 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 OXR1Q8N573 874 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 C2orf73Q8N5S3 287 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PROKR1Q8TCW9 393 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CXorf40AQ8TE69 158 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ITPKCQ96DU7 683 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms