RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MZT1Q08AG7 82 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 CTU1Q7Z7A3 348 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 S100A7AQ86SG5 101 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 TIGD4Q8IY51 512 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZFP3Q96NJ6 502 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ALG2Q9H553 416 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 KCNMB3Q9NPA1 279 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF226Q9NYT6 803 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 LAMP5Q9UJQ1 280 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZFR2Q9UPR6 939 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 TESMINQ9Y4I5 508 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 OR5K4A6NMS3 321 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 PRR5-ARHGAP8B1AHC4 643 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 CPNE6O95741 557 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 NRIP1P48552 1158 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 PLEKHN1Q494U1 663 aaPredicted RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 SCGB2B2Q4G0G5 96 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZYG11AQ6WRX3 759 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 SLC7A6OSQ96CW6 309 aaPredicted RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 DENND2DQ9H6A0 471 aaPredicted RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 RNPEPL1Q9HAU8 725 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 CNTN3Q9P232 1028 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ISPDA4D126 451 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 C2orf71A6NGG8 1288 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 FBP2O00757 339 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 RNF13O43567 381 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 TRMUO75648 421 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 HBQ1P09105 142 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF30P17039 623 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 VIPR1P32241 457 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 RORCP51449 518 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 HSD11B2P80365 405 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 RUNX2Q13950 521 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 HNRNPDQ14103 355 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 OR56A1Q8NGH5 318 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 BORCS5Q969J3 196 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 POLR2J3Q9H1A7 115 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 A0A1W2PPL8 197 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 EIF1AYO14602 144 aaKnown RBP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 ANKRD28O15084 1053 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 NUDT17P0C025 328 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 CSKP41240 450 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 RPS14P62263 151 aaKnown RBP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 AIMP2Q13155 320 aaKnown RBP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 FGL2Q14314 439 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 ITPRIPL2Q3MIP1 535 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 ANKRD7Q92527 254 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 CLPTM1LQ96KA5 538 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 SNTG1Q9NSN8 517 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 BLOC1S4Q9NUP1 217 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 GPR160Q9UJ42 338 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 NCANO14594 1321 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 ENTPD6O75354 484 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 GLSO94925 669 aaPredicted RBP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 HK1P19367 917 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 XKP51811 444 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 MOB2Q70IA6 237 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 AHSA2Q719I0 299 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 TRAPPC6BQ86SZ2 158 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 OR5L2Q8NGL0 311 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 LPGAT1Q92604 370 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 HDAC2Q92769 488 aaKnown RBP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 TTYH3Q9C0H2 523 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 HPF1Q9NWY4 346 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 TVP23BQ9NYZ1 205 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 DISC1C4P0D8 188 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 OAZ2O95190 189 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 C2P06681 752 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 SYN1P17600 705 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 GRIA2P42262 883 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 S100A10P60903 97 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 FOLH1Q04609 750 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 IRF5Q13568 498 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 SLBPQ14493 270 aaKnown RBP eCLIP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 TNFAIP8L2Q6P589 184 aaPredicted RBP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 FOXJ1Q92949 421 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 CD180Q99467 661 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 KATNBL1Q9H079 304 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 DNTTIP1Q9H147 329 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 MS4A12Q9NXJ0 267 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 MLXQ9UH92 298 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 ZDHHC9Q9Y397 364 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 TCRBV9S1A1TA0A576 114 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 C2orf74A8MZ97 194 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 M0R2N6 131 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 GNRHRP30968 328 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 PON3Q15166 354 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 LANCL3Q6ZV70 420 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF550Q7Z398 422 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 PELOQ9BRX2 385 aaKnown RBP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 G6PC3Q9BUM1 346 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 KCNIP1Q9NZI2 227 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 C15orf41Q9Y2V0 281 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 SOX1O00570 391 aaPredicted RBP10.92□□□□□ -0.66
SCN4A-201ENST00000435607 TMIEQ8NEW7 156 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 DBF4BQ8NFT6 615 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 SPATA22Q8NHS9 363 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 ROPN1LQ96C74 230 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 PCED1BQ96HM7 432 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms