RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SLBPQ14493 270 aaKnown RBP eCLIP16.1■□□□□ 0.17
USHBP1-203ENST00000431146 RBBP5Q15291 538 aaKnown RBP16.1■□□□□ 0.17
USHBP1-203ENST00000431146 CCDC85BQ15834 202 aaPredicted RBP16.1■□□□□ 0.17
USHBP1-203ENST00000431146 PGS1Q32NB8 556 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 ANKRD46Q86W74 232 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 GPR156Q8NFN8 814 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 RAD51AP1Q96B01 352 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 SLCO4A1Q96BD0 722 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 UHRF1Q96T88 793 aaPredicted RBP16.1■□□□□ 0.17
USHBP1-203ENST00000431146 CGREF1Q99674 301 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 ITM2CQ9NQX7 267 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 SPATA6Q9NWH7 488 aaPredicted RBP16.1■□□□□ 0.17
USHBP1-203ENST00000431146 PCDHGA11Q9Y5H2 935 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 TCRBV3S1A0A5B6 114 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 KCNH1O95259 989 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 SLC35G4P0C7Q5 338 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 ACADMP11310 421 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 PRPS2P11908 318 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 NDUFV2P19404 249 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 ACSL1P33121 698 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 CLDN8P56748 225 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 RPS13P62277 151 aaKnown RBP16.1■□□□□ 0.17
USHBP1-203ENST00000431146 PWP1Q13610 501 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 GRAMD1BQ3KR37 738 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 GTDC1Q4AE62 458 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 SFT2D3Q587I9 215 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 DCUN1D3Q8IWE4 304 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 GLB1L3Q8NCI6 653 aaPredicted RBP16.1■□□□□ 0.17
USHBP1-203ENST00000431146 ZNF740Q8NDX6 193 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 FLCNQ8NFG4 579 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 OR5K2Q8NHB8 316 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 ECSITQ9BQ95 431 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 SLC6A13Q9NSD5 602 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 GPRC5BQ9NZH0 403 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 RIMS3Q9UJD0 308 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 KANSL1LA0AUZ9 987 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 SERTM1A2A2V5 107 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 POM121BA6NF01 834 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 H0Y8X5 98 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 ARPC2O15144 300 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 STAMBPO95630 424 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 IL6P05231 212 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 ACADSP16219 412 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 KELP23276 732 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 MAGEA8P43361 318 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 MED27Q6P2C8 311 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 CANT1Q8WVQ1 401 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 SLC5A11Q8WWX8 675 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 APOOQ9BUR5 198 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 SLC24A3Q9HC58 644 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 C6orf203Q9P0P8 240 aaPredicted RBP16.09■□□□□ 0.17
USHBP1-203ENST00000431146 TMED5Q9Y3A6 229 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 GPSM3Q9Y4H4 160 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 AP4S1Q9Y587 144 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 GOLGA4Q13439 2230 aaKnown RBP16.09■□□□□ 0.17
USHBP1-203ENST00000431146 SHISA7A6NL88 538 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 C1GALT1C1LP0DN25 315 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 CDH1P12830 882 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 PSMB5P28074 263 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 MAPK1P28482 360 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 AQP4P55087 323 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 OR4D2P58180 307 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 PCDH1Q08174 1060 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 ACSM2AQ08AH3 577 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 PRAMEF14Q5SWL7 426 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 PRAMEF13Q5VWM6 474 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 ACSM2BQ68CK6 577 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 SYT12Q8IV01 421 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 C1orf52Q8N6N3 182 aaKnown RBP16.09■□□□□ 0.17
USHBP1-203ENST00000431146 OR2T34Q8NGX1 318 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 C12orf66Q96MD2 445 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 ANKRD27Q96NW4 1050 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 KLHL4Q9C0H6 718 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 SEMA6AQ9H2E6 1030 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 IKZF5Q9H5V7 419 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
USHBP1-203ENST00000431146 SLC25A37Q9NYZ2 338 aa16.09■□□□□ 0.17
USHBP1-203ENST00000431146 TCRBV21S2A2A0A5A6 115 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 PIPSLA2A3N6 862 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 NPIPB8E9PQR5 432 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 SAP18O00422 153 aaKnown RBP16.08■□□□□ 0.16
USHBP1-203ENST00000431146 CASQ2O14958 399 aaPredicted RBP16.08■□□□□ 0.16
USHBP1-203ENST00000431146 NPPAP01160 153 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 RPS6KA3P51812 740 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 MRPS21P82921 87 aaKnown RBP16.08■□□□□ 0.16
USHBP1-203ENST00000431146 ATG9BQ674R7 924 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 MSRB3Q8IXL7 192 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 OR7A2PQ8NGA2 310 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 LRTOMTQ8WZ04 291 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 INSM2Q96T92 566 aaPredicted RBP16.08■□□□□ 0.16
USHBP1-203ENST00000431146 FBRSQ9HAH7 460 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 PREBQ9HCU5 417 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 TRPV5Q9NQA5 729 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.08■□□□□ 0.16
USHBP1-203ENST00000431146 TAC3Q9UHF0 121 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 NDRG2Q9UN36 371 aaKnown RBP16.08■□□□□ 0.16
USHBP1-203ENST00000431146 NCKAP1Q9Y2A7 1128 aa16.08■□□□□ 0.16
USHBP1-203ENST00000431146 DNMT3AQ9Y6K1 912 aaPredicted RBP16.08■□□□□ 0.16
USHBP1-203ENST00000431146 TGFB1P01137 390 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 GSNP06396 782 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms