RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SPRTNQ9H040 489 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 HDHD2Q9H0R4 259 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 SMURF2Q9HAU4 748 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 FABP12A6NFH5 140 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 IPO13O94829 963 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 LBPP18428 481 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 CST5P28325 142 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 CA5AP35218 305 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 STARP49675 285 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 HSF2Q03933 536 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 VPS26BQ4G0F5 336 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 DGKKQ5KSL6 1271 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 C10orf62Q5T681 223 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 PRSS48Q7RTY5 328 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 GHITMQ9H3K2 345 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 SLC17A6Q9P2U8 582 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 MICAL3Q7RTP6 2002 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 NT5C1B-RDH14C9J2C7 533 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 HOXD8P13378 290 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 HNRNPLP14866 589 aaKnown RBP eCLIP14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 CD72P21854 359 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 CUZD1Q86UP6 607 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 TMEM151BQ8IW70 566 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 AGAP2Q99490 1192 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 CINPQ9BW66 212 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 PCDHGB3Q9Y5G1 929 aa14.06□□□□□ -0.16
SYNGAP1-203ENST00000428982 EFCAB14O75071 495 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 DHFRP00374 187 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 CSKP41240 450 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 MAZP56270 477 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 BAMBIQ13145 260 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ZNF534Q76KX8 674 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ZNF557Q8N988 423 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 OR4D10Q8NGI6 311 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 RDH12Q96NR8 316 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 NPY6RQ99463 290 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 CLSTN3Q9BQT9 956 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 RERGLQ9H628 205 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 PRMT8Q9NR22 394 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 FBXW11Q9UKB1 542 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 METTL15A6NJ78 407 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 SNX4O95219 450 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 CYP11A1P05108 521 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 HLA-DPA1P20036 260 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 CCR1P32246 355 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ATP4BP51164 291 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 SLC39A12Q504Y0 691 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 CCDC157Q569K6 752 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 KIAA0930Q6ICG6 404 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ARL6IP6Q8N6S5 226 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 CELF6Q96J87 481 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 PIWIL1Q96J94 861 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 IL1RAPQ9NPH3 570 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 SLC23A1Q9UHI7 598 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 RNF112Q9ULX5 631 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 CLCA3PQ9Y6N3 262 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 HNMTP50135 292 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ATXN1P54253 815 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ADARB1P78563 741 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ELP6Q0PNE2 266 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 KRT78Q8N1N4 520 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 OR6C4Q8NGE1 309 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 POP5Q969H6 163 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 FBXO32Q969P5 355 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ISL2Q96A47 359 aa14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 ERMAPQ96PL5 475 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-203ENST00000428982 SMLR1H3BR10 107 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 UGT2B17O75795 530 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 CNTN5O94779 1100 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 OGNP20774 298 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 MEOX2P50222 304 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 UGT2B15P54855 530 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 IL31Q6EBC2 164 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 CDH26Q8IXH8 852 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 OR5T2Q8NGG2 359 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 NANPQ8TBE9 248 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 BTN2A3PQ96KV6 586 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 CD93Q9NPY3 652 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 NDUFAF4Q9P032 175 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 MFHAS1Q9Y4C4 1052 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 OR6C65A6NJZ3 312 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 TRIM77I1YAP6 450 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 UBXN8O00124 270 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 ADAMTS4O75173 837 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 PTP4A3O75365 173 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 RPS17P08708 135 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 IQCF3P0C7M6 154 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 OXTRP30559 389 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 GNPDA1P46926 289 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 ZNF235Q14590 738 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 NAPRTQ6XQN6 538 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 ZNF680Q8NEM1 530 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 ZNF558Q96NG5 402 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 MRM3Q9HC36 420 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 HCN3Q9P1Z3 774 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 SUPT3HB4E1H0 165 aa14.04□□□□□ -0.16
SYNGAP1-203ENST00000428982 KRBOX1C9JBD0 128 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms