RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ZNF490Q9ULM2 529 aaPredicted RBP8.56□□□□□ -1.04
SMC6-204ENST00000428868 TRIM33Q9UPN9 1127 aa8.56□□□□□ -1.04
SMC6-204ENST00000428868 APOBEC2Q9Y235 224 aaKnown RBP8.56□□□□□ -1.04
SMC6-204ENST00000428868 DYRK1BQ9Y463 629 aa8.56□□□□□ -1.04
SMC6-204ENST00000428868 HEBP2Q9Y5Z4 205 aa8.56□□□□□ -1.04
SMC6-204ENST00000428868 COPG1Q9Y678 874 aaKnown RBP8.56□□□□□ -1.04
SMC6-204ENST00000428868 R4GN57 208 aa8.56□□□□□ -1.04
SMC6-204ENST00000428868 CCDC88CQ9P219 2028 aa8.56□□□□□ -1.04
SMC6-204ENST00000428868 FEZF1A0PJY2 475 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 PIPSLA2A3N6 862 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 CAPN14A8MX76 684 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 C9JVG2 144 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 PPM1DO15297 605 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 PEX11AO75192 247 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 DCTN3O75935 186 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 CBX6O95503 412 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 VIPP01282 170 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 STATHP02808 62 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 CHRM5P08912 532 aaPredicted RBP8.55□□□□□ -1.04
SMC6-204ENST00000428868 C1GALT1C1LP0DN25 315 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 POLR2CP19387 275 aaPredicted RBP8.55□□□□□ -1.04
SMC6-204ENST00000428868 CASP2P42575 452 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 LSSP48449 732 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 HNRNPKP61978 463 aaKnown RBP eCLIP8.55□□□□□ -1.043e-6■□□□□ 9
SMC6-204ENST00000428868 PCDH1Q08174 1060 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 GRIK2Q13002 908 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 DDX39BQ13838 428 aaKnown RBP8.55□□□□□ -1.04
SMC6-204ENST00000428868 COL9A2Q14055 689 aaPredicted RBP8.55□□□□□ -1.04
SMC6-204ENST00000428868 SIM2Q14190 667 aaPredicted RBP8.55□□□□□ -1.04
SMC6-204ENST00000428868 PLCL1Q15111 1095 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 SF1Q15637 639 aaKnown RBP8.55□□□□□ -1.04
SMC6-204ENST00000428868 KIF26BQ2KJY2 2108 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.55□□□□□ -1.04
SMC6-204ENST00000428868 KIAA1614Q5VZ46 1190 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 LIPJQ5W064 366 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 ICE2Q659A1 982 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 ATG9BQ674R7 924 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 CHSY3Q70JA7 882 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 KANSL1Q7Z3B3 1105 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 VN1R5Q7Z5H4 357 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 AMIGO1Q86WK6 493 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 C17orf64Q86WR6 236 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 GKN2Q86XP6 184 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 FAM129CQ86XR2 697 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 GATAD2AQ86YP4 633 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 TRIM48Q8IWZ4 208 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 ARL14Q8N4G2 192 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 SETD7Q8WTS6 366 aaKnown RBP8.55□□□□□ -1.04
SMC6-204ENST00000428868 NUDT8Q8WV74 236 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 STON2Q8WXE9 905 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 RSC1A1Q92681 617 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 TUBGCP3Q96CW5 907 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 WDR34Q96EX3 536 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 LRRC37BQ96QE4 947 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 PLCD4Q9BRC7 762 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 C1orf50Q9BV19 199 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 POT1Q9NUX5 634 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 GPRC5BQ9NZH0 403 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 SPASTQ9UBP0 616 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 STK38LQ9Y2H1 464 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 KCNE2Q9Y6J6 123 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 COLEC10Q9Y6Z7 277 aa8.55□□□□□ -1.04
SMC6-204ENST00000428868 ASCC3Q8N3C0 2202 aaKnown RBP8.54□□□□□ -1.04
SMC6-204ENST00000428868 KIR2DS5A0A0G2JLQ3 304 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 A0A0G2JNG1 304 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 OR6C74A6NCV1 312 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 ISM1B1AKI9 464 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 LMO7DNF2Z398 122 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 H7BY64 318 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 KIR2DS3K7RE56 304 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 HAT1O14929 419 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 LSM1O15116 133 aaKnown RBP8.54□□□□□ -1.04
SMC6-204ENST00000428868 LCMT2O60294 686 aaKnown RBP8.54□□□□□ -1.04
SMC6-204ENST00000428868 PRAMEF10O60809 474 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 TBX6O95947 436 aaPredicted RBP8.54□□□□□ -1.04
SMC6-204ENST00000428868 CFIP05156 583 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 PCNAP12004 261 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 UGT2B7P16662 529 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 TYRP1P17643 537 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 GNAZP19086 355 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 CCND1P24385 295 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 NDUFS1P28331 727 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 EPHA8P29322 1005 aaPredicted RBP8.54□□□□□ -1.04
SMC6-204ENST00000428868 SHMT2P34897 504 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 CPA2P48052 419 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 DIO3P55073 304 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 NME5P56597 212 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 RPS13P62277 151 aaKnown RBP8.54□□□□□ -1.04
SMC6-204ENST00000428868 RPL38P63173 70 aaKnown RBP8.54□□□□□ -1.04
SMC6-204ENST00000428868 CSNK1G2P78368 415 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 REEP5Q00765 189 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 HHEXQ03014 270 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 KLF10Q13118 480 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 KIR2DS5Q14953 304 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 NR6A1Q15406 480 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 TEAD4Q15561 434 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 TBCCQ15814 346 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 ZNF528Q3MIS6 628 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 C6orf136Q5SQH8 315 aa8.54□□□□□ -1.04
SMC6-204ENST00000428868 FRG2Q64ET8 278 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms