RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 MFSD1Q9H3U5 465 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SPON1Q9HCB6 807 aa5□□□□□ -1.61
RIF1-203ENST00000428287 NUFIP1Q9UHK0 495 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 GABRQQ9UN88 632 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CHP2O43745 196 aa5□□□□□ -1.61
RIF1-203ENST00000428287 IL1AP01583 271 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CD1DP15813 335 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TGFBR1P36897 503 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CLCN3P51790 818 aa5□□□□□ -1.61
RIF1-203ENST00000428287 MGAT3Q09327 533 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CLLU1Q5K131 121 aa5□□□□□ -1.61
RIF1-203ENST00000428287 NEK5Q6P3R8 708 aa5□□□□□ -1.61
RIF1-203ENST00000428287 KDELC1Q6UW63 502 aa5□□□□□ -1.61
RIF1-203ENST00000428287 METTL7BQ6UX53 244 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ZNF551Q7Z340 670 aaPredicted RBP5□□□□□ -1.61
RIF1-203ENST00000428287 ACOT1Q86TX2 421 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PHF6Q8IWS0 365 aaKnown RBP eCLIP5□□□□□ -1.61
RIF1-203ENST00000428287 ENTHD1Q8IYW4 607 aa5□□□□□ -1.61
RIF1-203ENST00000428287 C9orf62Q8N4C0 152 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SPATA22Q8NHS9 363 aa5□□□□□ -1.61
RIF1-203ENST00000428287 GHITMQ9H3K2 345 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ZFP64Q9NPA5 681 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SH3BP4Q9P0V3 963 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PCTPQ9UKL6 214 aa5□□□□□ -1.61
RIF1-203ENST00000428287 DIMT1Q9UNQ2 313 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 PTGDR2Q9Y5Y4 395 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ZNF670-ZNF695F2Z2N8 137 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FAM72CH0Y354 149 aa5□□□□□ -1.61
RIF1-203ENST00000428287 NPR3P17342 541 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ALOX12P18054 663 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PRDX3P30048 256 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 SLC9A3P48764 834 aa5□□□□□ -1.61
RIF1-203ENST00000428287 C21orf58P58505 322 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PWP1Q13610 501 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FAM72AQ5TYM5 149 aa5□□□□□ -1.61
RIF1-203ENST00000428287 HECTD2Q5U5R9 776 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FAM72DQ6L9T8 149 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TEX261Q6UWH6 196 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ENPP6Q6UWR7 440 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CEP68Q76N32 757 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FAM72BQ86X60 149 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ZDHHC21Q8IVQ6 265 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ZZZ3Q8IYH5 903 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TEX26Q8N6G2 289 aa5□□□□□ -1.61
RIF1-203ENST00000428287 YIPF7Q8N8F6 280 aa5□□□□□ -1.61
RIF1-203ENST00000428287 NAT16Q8N8M0 369 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ANKRD53Q8N9V6 530 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ZNF540Q8NDQ6 660 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PTP4A1Q93096 173 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FUBP1Q96AE4 644 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 SLC25A46Q96AG3 418 aa5□□□□□ -1.61
RIF1-203ENST00000428287 MIR1-1HGQ9H1L0 117 aa5□□□□□ -1.61
RIF1-203ENST00000428287 HHATLQ9HCP6 504 aa5□□□□□ -1.61
RIF1-203ENST00000428287 MID1IP1Q9NPA3 183 aa5□□□□□ -1.61
RIF1-203ENST00000428287 VNN3Q9NY84 501 aa5□□□□□ -1.61
RIF1-203ENST00000428287 U3KQ87 197 aa5□□□□□ -1.61
RIF1-203ENST00000428287 A0A1W2PQ72 361 aa5□□□□□ -1.61
RIF1-203ENST00000428287 MATN3O15232 486 aa5□□□□□ -1.61
RIF1-203ENST00000428287 GPX5O75715 221 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CTPS1P17812 591 aa5□□□□□ -1.61
RIF1-203ENST00000428287 MBTD1Q05BQ5 628 aa5□□□□□ -1.61
RIF1-203ENST00000428287 LARS2Q15031 903 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 SSX1Q16384 188 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PRSS36Q5K4E3 855 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TMEM201Q5SNT2 666 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TFAP2EQ6VUC0 442 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TRMT1LQ7Z2T5 733 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 GPALPP1Q8IXQ4 340 aa5□□□□□ -1.61
RIF1-203ENST00000428287 DEFB106AQ8N104 65 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FNDC5Q8NAU1 212 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PROKR2Q8NFJ6 384 aa5□□□□□ -1.61
RIF1-203ENST00000428287 OR4F6Q8NGB9 312 aa5□□□□□ -1.61
RIF1-203ENST00000428287 OR52K2Q8NGK3 314 aa5□□□□□ -1.61
RIF1-203ENST00000428287 OR10A6Q8NH74 314 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SCMH1Q96GD3 660 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TBCDQ9BTW9 1192 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FOLH1BQ9HBA9 442 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ZNF302Q9NR11 478 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ERVK13-1Q9NX77 482 aa5□□□□□ -1.61
RIF1-203ENST00000428287 LIMD1Q9UGP4 676 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ATPIF1Q9UII2 106 aa5□□□□□ -1.61
RIF1-203ENST00000428287 UTS2RQ9UKP6 389 aa5□□□□□ -1.61
RIF1-203ENST00000428287 HSPB11Q9Y547 144 aa5□□□□□ -1.61
RIF1-203ENST00000428287 C9JVG2 144 aa5□□□□□ -1.61
RIF1-203ENST00000428287 WNT9AO14904 365 aa5□□□□□ -1.61
RIF1-203ENST00000428287 RAF1P04049 648 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FDXRP22570 491 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ALDH9A1P49189 494 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SERPINH1P50454 418 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 MTPNP58546 118 aa5□□□□□ -1.61
RIF1-203ENST00000428287 IL5RAQ01344 420 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SNTA1Q13424 505 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PDZK1Q5T2W1 519 aa5□□□□□ -1.61
RIF1-203ENST00000428287 JADE1Q6IE81 842 aa5□□□□□ -1.61
RIF1-203ENST00000428287 AMIGO1Q86WK6 493 aa5□□□□□ -1.61
RIF1-203ENST00000428287 KRT73Q86Y46 540 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SGTBQ96EQ0 304 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CITED4Q96RK1 184 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SLC22A4Q9H015 551 aa5□□□□□ -1.61
RIF1-203ENST00000428287 GLS2Q9UI32 602 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms