RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 MBD3L4A6NDZ8 208 aaPredicted RBP8.62□□□□□ -1.03
LSG1-202ENST00000427461 OR2W5A6NFC9 320 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 MBD3L5A6NJ08 208 aaPredicted RBP8.62□□□□□ -1.03
LSG1-202ENST00000427461 CLCA1A8K7I4 914 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 DNAJB6O75190 326 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 C8orf89P0DMQ9 161 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 ATP1A3P13637 1013 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 HOXB1P14653 301 aaPredicted RBP8.62□□□□□ -1.03
LSG1-202ENST00000427461 KRT81Q14533 505 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 KIR2DS3Q14952 304 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 BOLA3Q53S33 107 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 FIGNQ5HY92 759 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 ZDHHC20Q5W0Z9 365 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 CCDC70Q6NSX1 233 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 B3GNT6Q6ZMB0 384 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 CPEB2Q7Z5Q1 589 aaKnown RBP8.62□□□□□ -1.03
LSG1-202ENST00000427461 ZC3H7AQ8IWR0 971 aaKnown RBP8.62□□□□□ -1.03
LSG1-202ENST00000427461 SULF2Q8IWU5 870 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 SLC25A41Q8N5S1 370 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 AMER3Q8N944 861 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 LINC01555Q8NAE3 123 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 C16orf52Q8NHV5 167 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 C19orf24Q9BVV8 132 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 SARGQ9BW04 601 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 FAM96AQ9H5X1 160 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 ASB8Q9H765 288 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 ENAMQ9NRM1 1142 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 TGP01266 2768 aa8.62□□□□□ -1.03
LSG1-202ENST00000427461 TUBAL3A6NHL2 446 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 SLC16A5O15375 505 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 SPRY1O43609 319 aaPredicted RBP8.61□□□□□ -1.03
LSG1-202ENST00000427461 HRGP04196 525 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 HSP90AA1P07900 732 aaKnown RBP8.61□□□□□ -1.03
LSG1-202ENST00000427461 ATP1B2P14415 290 aaPredicted RBP8.61□□□□□ -1.03
LSG1-202ENST00000427461 PCK1P35558 622 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 PEX19P40855 299 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 ITGA8P53708 1063 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 GPR85P60893 370 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 MAT1AQ00266 395 aaKnown RBP8.61□□□□□ -1.03
LSG1-202ENST00000427461 DMTNQ08495 405 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 BRD3Q15059 726 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 SIRPB2Q5JXA9 342 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 CATSPEREQ5SY80 951 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 GLT6D1Q7Z4J2 308 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 HIPK1Q86Z02 1210 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 BLOC1S5Q8TDH9 187 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 RNASE6Q93091 150 aaKnown RBP8.61□□□□□ -1.03
LSG1-202ENST00000427461 KIAA1191Q96A73 305 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 MMABQ96EY8 250 aaPredicted RBP8.61□□□□□ -1.03
LSG1-202ENST00000427461 DCUN1D1Q96GG9 259 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 IL17FQ96PD4 163 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 ZFYVE21Q9BQ24 234 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 PLA2G12AQ9BZM1 189 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 C14orf105Q9NVL8 296 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.61□□□□□ -1.03
LSG1-202ENST00000427461 PKP3Q9Y446 797 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 ARHGAP21Q5T5U3 1957 aa8.61□□□□□ -1.03
LSG1-202ENST00000427461 SVEP1Q4LDE5 3571 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 A0A087X1B8 175 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 PEX1O43933 1283 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 SRPX2O60687 465 aaPredicted RBP8.6□□□□□ -1.03
LSG1-202ENST00000427461 SRP72O76094 671 aaKnown RBP8.6□□□□□ -1.03
LSG1-202ENST00000427461 STATHP02808 62 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 ACADLP28330 430 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 TPP2P29144 1249 aaPredicted RBP8.6□□□□□ -1.03
LSG1-202ENST00000427461 PKLRP30613 574 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 SLC26A3P40879 764 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 NR1H2P55055 460 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 IFI35P80217 286 aaPredicted RBP8.6□□□□□ -1.03
LSG1-202ENST00000427461 SF1Q15637 639 aaKnown RBP8.6□□□□□ -1.03
LSG1-202ENST00000427461 MUM1Q2TAK8 710 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 CCDC183Q5T5S1 534 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 HEPHL1Q6MZM0 1159 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 TBC1D21Q8IYX1 336 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 POGLUT1Q8NBL1 392 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 METTL21AQ8WXB1 218 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 CABS1Q96KC9 395 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 SRPK1Q96SB4 655 aaKnown RBP8.6□□□□□ -1.03
LSG1-202ENST00000427461 CYTH2Q99418 400 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 YIPF4Q9BSR8 244 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 CNPPD1Q9BV87 410 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 TGIF2Q9GZN2 237 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 VN1R1Q9GZP7 353 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 SLC25A51Q9H1U9 297 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 TRABDQ9H4I3 376 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 SYNPO2LQ9H987 977 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 MKKSQ9NPJ1 570 aaPredicted RBP8.6□□□□□ -1.03
LSG1-202ENST00000427461 FKBPLQ9UIM3 349 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 LIPGQ9Y5X9 500 aa8.6□□□□□ -1.03
LSG1-202ENST00000427461 KIAA1549Q9HCM3 1950 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 FIGNL2A6NMB9 653 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 NDC80O14777 642 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 STX7O15400 261 aaKnown RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 BMP5P22003 454 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 PSMB5P28074 263 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 CYB561P49447 251 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 ASCL1P50553 236 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 PRSS12P56730 875 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 SNRPNP63162 240 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms