RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 MFRPQ9BY79 579 aa16.96■□□□□ 0.31
HDLBP-212ENST00000426343 DDX47Q9H0S4 455 aaKnown RBP16.96■□□□□ 0.31
HDLBP-212ENST00000426343 ZNF552Q9H707 407 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-212ENST00000426343 ZNF304Q9HCX3 659 aa16.96■□□□□ 0.31
HDLBP-212ENST00000426343 SLAMF7Q9NQ25 335 aa16.96■□□□□ 0.31
HDLBP-212ENST00000426343 SEMA3GQ9NS98 782 aa16.96■□□□□ 0.31
HDLBP-212ENST00000426343 CTSFQ9UBX1 484 aa16.96■□□□□ 0.31
HDLBP-212ENST00000426343 TAC3Q9UHF0 121 aa16.96■□□□□ 0.31
HDLBP-212ENST00000426343 VPS4AQ9UN37 437 aa16.96■□□□□ 0.31
HDLBP-212ENST00000426343 RELNP78509 3460 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 SMAPO00193 183 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 SOCS6O14544 535 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 DHX9Q08211 1270 aaKnown RBP16.95■□□□□ 0.3
HDLBP-212ENST00000426343 TSTA3Q13630 321 aaPredicted RBP16.95■□□□□ 0.3
HDLBP-212ENST00000426343 SPANXN3Q5MJ09 141 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 LRRC8EQ6NSJ5 796 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 KIRREL2Q6UWL6 708 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 LRRC56Q8IYG6 542 aaPredicted RBP16.95■□□□□ 0.3
HDLBP-212ENST00000426343 CPNE9Q8IYJ1 553 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 FAM26EQ8N5C1 309 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 METTL27Q8N6F8 245 aaPredicted RBP16.95■□□□□ 0.3
HDLBP-212ENST00000426343 COL26A1Q96A83 441 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 MVB12AQ96EY5 273 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 SOX17Q9H6I2 414 aaPredicted RBP16.95■□□□□ 0.3
HDLBP-212ENST00000426343 FBXL4Q9UKA2 621 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 CDC14AQ9UNH5 594 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 MAU2Q9Y6X3 613 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 NBASA2RRP1 2371 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 FLNCQ14315 2725 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 PCSK5Q92824 1860 aa16.95■□□□□ 0.3
HDLBP-212ENST00000426343 MED13Q9UHV7 2174 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 TXNDC9O14530 226 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 SYF2O95926 243 aaKnown RBP16.94■□□□□ 0.3
HDLBP-212ENST00000426343 EZRP15311 586 aaKnown RBP16.94■□□□□ 0.3
HDLBP-212ENST00000426343 IVDP26440 423 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 CARSP49589 748 aaKnown RBP16.94■□□□□ 0.3
HDLBP-212ENST00000426343 OCA2Q04671 838 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 INPP5JQ15735 1006 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-212ENST00000426343 GARNL3Q5VVW2 1013 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 PRAMEF13Q5VWM6 474 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 KIAA0408Q6ZU52 694 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 SYDE1Q6ZW31 735 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-212ENST00000426343 UBE2R2Q712K3 238 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-212ENST00000426343 CNTN4Q8IWV2 1026 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 DTWD1Q8N5C7 304 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 CSNK1A1LQ8N752 337 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 PPFIBP2Q8ND30 876 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 STT3BQ8TCJ2 826 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 TM9SF4Q92544 642 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 CABS1Q96KC9 395 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 C10orf90Q96M02 699 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 OR2A5Q96R48 311 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 TAS2R13Q9NYV9 303 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 ZNF282Q9UDV7 671 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-212ENST00000426343 TRMT6Q9UJA5 497 aaKnown RBP16.94■□□□□ 0.3
HDLBP-212ENST00000426343 HS3ST3B1Q9Y662 390 aa16.94■□□□□ 0.3
HDLBP-212ENST00000426343 HECTD1Q9ULT8 2610 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 IGLV3-12A0A075B6K2 115 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 MASP2O00187 686 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 ZGLP1P0C6A0 271 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 HRH2P25021 359 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 GABRB3P28472 473 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 RGS4P49798 205 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 TIAL1Q01085 375 aaKnown RBP eCLIP16.93■□□□□ 0.3
HDLBP-212ENST00000426343 SRSF1Q07955 248 aaKnown RBP eCLIP16.93■□□□□ 0.3
HDLBP-212ENST00000426343 MORF4L2Q15014 288 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 RBBP7Q16576 425 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 PLEKHN1Q494U1 663 aaPredicted RBP16.93■□□□□ 0.3
HDLBP-212ENST00000426343 MSS51Q4VC12 460 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 SHISA6Q6ZSJ9 500 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 PIWIL4Q7Z3Z4 852 aaKnown RBP16.93■□□□□ 0.3
HDLBP-212ENST00000426343 GALNT7Q86SF2 657 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 SPNS2Q8IVW8 549 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 MCOLN3Q8TDD5 553 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 RERGQ96A58 199 aaPredicted RBP16.93■□□□□ 0.3
HDLBP-212ENST00000426343 MIEF2Q96C03 454 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 CCDC138Q96M89 665 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 RUNDC3BQ96NL0 473 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 PCBD2Q9H0N5 130 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 STOX2Q9P2F5 926 aaPredicted RBP16.93■□□□□ 0.3
HDLBP-212ENST00000426343 RUVBL1Q9Y265 456 aaKnown RBP16.93■□□□□ 0.3
HDLBP-212ENST00000426343 B3GNT3Q9Y2A9 372 aa16.93■□□□□ 0.3
HDLBP-212ENST00000426343 SLC16A5O15375 505 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 PRPF4O43172 522 aaKnown RBP eCLIP16.92■□□□□ 0.38e-7■■■■□ 19.6
HDLBP-212ENST00000426343 AHSGP02765 367 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 C8GP07360 202 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 FBLP22087 321 aaKnown RBP16.92■□□□□ 0.3
HDLBP-212ENST00000426343 ITGA3P26006 1051 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 IMPA1P29218 277 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 KLC1Q07866 573 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 DSG2Q14126 1118 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 BBS9Q3SYG4 887 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 TUBB8Q3ZCM7 444 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 THEMIS2Q5TEJ8 643 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 CREG2Q8IUH2 290 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 IGDCC3Q8IVU1 814 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 PDIK1LQ8N165 341 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 ZADH2Q8N4Q0 377 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 EEF1AKMT1Q8WVE0 214 aa16.92■□□□□ 0.3
HDLBP-212ENST00000426343 NDNQ99608 321 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms