RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 OR2A1Q8NGT9 310 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 AGR3Q8TD06 166 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 SAP25Q8TEE9 199 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 NEIL2Q969S2 332 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 COL26A1Q96A83 441 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 IL17FQ96PD4 163 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 AIF1LQ9BQI0 150 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CCDC28BQ9BUN5 200 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 ELOVL6Q9H5J4 265 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 OCEL1Q9H607 264 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 XKR8Q9H6D3 395 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 PELI2Q9HAT8 420 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 KCNK13Q9HB14 408 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 RIC8BQ9NVN3 520 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 UCKL1Q9NWZ5 548 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 GMEB2Q9UKD1 530 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 TRIM33Q9UPN9 1127 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 ICKQ9UPZ9 632 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 RNF11Q9Y3C5 154 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 ASB1Q9Y576 335 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 DNAJC15Q9Y5T4 150 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 R4GN57 208 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CFAP47Q6ZTR5 3102 aa9.96□□□□□ -0.81
MDC1-205ENST00000425072 GOLGA8QA0A0J9YX86 632 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 GOLGA8OA6NCC3 632 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 OR6C74A6NCV1 312 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 GOLGA8NF8WBI6 632 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 EBAG9O00559 213 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 ZNF195O14628 629 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 PPM1DO15297 605 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 MAP3K7O43318 606 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 RGS14O43566 566 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 PCDHGA12O60330 932 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 NOBOXO60393 691 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 DIAPH2O60879 1101 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 SDC3O75056 442 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 DCTN3O75935 186 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 EPORP19235 508 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 EPHA8P29322 1005 aaPredicted RBP9.96□□□□□ -0.82
MDC1-205ENST00000425072 SERPINB3P29508 390 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 PRDX3P30048 256 aaKnown RBP9.96□□□□□ -0.82
MDC1-205ENST00000425072 SERPINB1P30740 379 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 IDH3AP50213 366 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 DUSP3P51452 185 aaPredicted RBP9.96□□□□□ -0.82
MDC1-205ENST00000425072 EPHA4P54764 986 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 PHEXP78562 749 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 TRAF3Q13114 568 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 SHBQ15464 509 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 LPAL2Q16609 132 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 CPSF6Q16630 551 aaKnown RBP eCLIP9.96□□□□□ -0.82
MDC1-205ENST00000425072 INAVAQ3KP66 663 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 CLEC6AQ6EIG7 209 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 GRHL2Q6ISB3 625 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 LETMD1Q6P1Q0 360 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 ATG14Q6ZNE5 492 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 DDIASQ8IXT1 998 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 ADGRF3Q8IZF5 1079 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 GBP7Q8N8V2 638 aaPredicted RBP9.96□□□□□ -0.82
MDC1-205ENST00000425072 FAM181AQ8N9Y4 354 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 LINC01555Q8NAE3 123 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 OR4K1Q8NGD4 311 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 OR4C6Q8NH72 309 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 RFWD2Q8NHY2 731 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 ACTRT2Q8TDY3 377 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 PATE1Q8WXA2 126 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 THOC1Q96FV9 657 aaKnown RBP9.96□□□□□ -0.82
MDC1-205ENST00000425072 METTL2AQ96IZ6 378 aaKnown RBP9.96□□□□□ -0.82
MDC1-205ENST00000425072 CDK15Q96Q40 435 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 ACAT2Q9BWD1 397 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 TMEM120AQ9BXJ8 343 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 NUF2Q9BZD4 464 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 MEAF6Q9HAF1 191 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 MRPS30Q9NP92 439 aaKnown RBP9.96□□□□□ -0.82
MDC1-205ENST00000425072 LRIT1Q9P2V4 623 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 HEY2Q9UBP5 337 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 TAC3Q9UHF0 121 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 ZNF225Q9UK10 706 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 ZNF490Q9ULM2 529 aaPredicted RBP9.96□□□□□ -0.82
MDC1-205ENST00000425072 PADI4Q9UM07 663 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 FIS1Q9Y3D6 152 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 TSC22D4Q9Y3Q8 395 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 TIMM22Q9Y584 194 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 PCDHGB2Q9Y5G2 931 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 MYO15AQ9UKN7 3530 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 KMT2EQ8IZD2 1858 aa9.96□□□□□ -0.82
MDC1-205ENST00000425072 TP53BP1Q12888 1972 aaPredicted RBP9.95□□□□□ -0.82
MDC1-205ENST00000425072 PRAMEF33A0A0G2JMD5 474 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 A0A1W2PPV9 198 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 KRT87PA6NCN2 255 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 ANKDD1BA6NHY2 528 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 LILRA5A6NI73 299 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 E7EQ34 232 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 H7BY64 318 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 FOXE1O00358 373 aaPredicted RBP9.95□□□□□ -0.82
MDC1-205ENST00000425072 MANBAO00462 879 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 BTN3A3O00478 584 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 FOXD2O60548 495 aaPredicted RBP9.95□□□□□ -0.82
MDC1-205ENST00000425072 UBXN7O94888 489 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 ZNF806P0C7X5 589 aa9.95□□□□□ -0.82
MDC1-205ENST00000425072 HSD3B1P14060 373 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms