RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 C7orf34Q96L11 122 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 BARD1Q99728 777 aaKnown RBP14.78□□□□□ -0.04
C9orf3-204ENST00000424143 HOXD1Q9GZZ0 328 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 CPA4Q9UI42 421 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 ZNF229Q9UJW7 825 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 TSC22D4Q9Y3Q8 395 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 PCDHGA6Q9Y5G7 932 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 U3KQV3 271 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 SCN8AQ9UQD0 1980 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 M0R082 166 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 DYRK3O43781 588 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 PCDHGA12O60330 932 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 EPN2O95208 641 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 VNN2O95498 520 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 OXSR1O95747 527 aaPredicted RBP14.77□□□□□ -0.04
C9orf3-204ENST00000424143 ZNF682O95780 498 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 GUCA1CO95843 209 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 RPLP0P05388 317 aaKnown RBP14.77□□□□□ -0.04
C9orf3-204ENST00000424143 C8GP07360 202 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 MPC1LP0DKB6 136 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 AMD1P17707 334 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 POLR2EP19388 210 aaKnown RBP14.77□□□□□ -0.04
C9orf3-204ENST00000424143 OR1G1P47890 313 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 SLC6A12P48065 614 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 PCYT1AP49585 367 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.77□□□□□ -0.04
C9orf3-204ENST00000424143 PCDH1Q08174 1060 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 ELAVL2Q12926 359 aaKnown RBP14.77□□□□□ -0.04
C9orf3-204ENST00000424143 PPP1R8Q12972 351 aaKnown RBP14.77□□□□□ -0.04
C9orf3-204ENST00000424143 CSTF3Q12996 717 aaKnown RBP14.77□□□□□ -0.04
C9orf3-204ENST00000424143 IRF3Q14653 427 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 CDKN3Q16667 212 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 ADGRF1Q5T601 910 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 ATAD3BQ5T9A4 648 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 C19orf48Q6RUI8 117 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 PTOV1Q86YD1 416 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 ENTHD1Q8IYW4 607 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 DNAJC22Q8N4W6 341 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 TTC9BQ8N6N2 239 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 ATG16L2Q8NAA4 619 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 TRPV1Q8NER1 839 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 SELENOMQ8WWX9 145 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 EXOC2Q96KP1 924 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 COL21A1Q96P44 957 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 SMIM14Q96QK8 99 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 COPS4Q9BT78 406 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 SLC12A9Q9BXP2 914 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 ASB8Q9H765 288 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 THUMPD1Q9NXG2 353 aaKnown RBP14.77□□□□□ -0.04
C9orf3-204ENST00000424143 KIF17Q9P2E2 1029 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 TRAPPC4Q9Y296 219 aa14.77□□□□□ -0.04
C9orf3-204ENST00000424143 CXorf51AA0A1B0GTR3 108 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 CLCA1A8K7I4 914 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 CBX4O00257 560 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 SNPHO15079 494 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 SOCS5O75159 536 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 PRAMEF1O95521 474 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 CDKN2CP42773 168 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 ALDH9A1P49189 494 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 TPTEP56180 551 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 DEFA1P59665 94 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 DEFA3P59666 94 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 VLDLRP98155 873 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 SP140Q13342 867 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 CAMK2GQ13555 558 aaPredicted RBP14.77□□□□□ -0.05
C9orf3-204ENST00000424143 RNF219Q5W0B1 726 aaPredicted RBP14.77□□□□□ -0.05
C9orf3-204ENST00000424143 ZCCHC8Q6NZY4 707 aaKnown RBP14.77□□□□□ -0.05
C9orf3-204ENST00000424143 CCDC81Q6ZN84 652 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 CAMKMTQ7Z624 323 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 DSG4Q86SJ6 1040 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 P3H2Q8IVL5 708 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 LKAAEAR1Q8TD35 194 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 ATL1Q8WXF7 558 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 PROX1Q92786 737 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 MYO19Q96H55 970 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 LYSMD1Q96S90 227 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 CCDC32Q9BV29 185 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 ELOVL6Q9H5J4 265 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 ZFYVE1Q9HBF4 777 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 SPASTQ9UBP0 616 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 ENOPH1Q9UHY7 261 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 BTNL2Q9UIR0 455 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 PCDHB11Q9Y5F2 797 aa14.77□□□□□ -0.05
C9orf3-204ENST00000424143 A0A075B6Q4 140 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 FPGTO14772 594 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 ASNA1O43681 348 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 MED26O95402 600 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 LCKP06239 509 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 CYBAP13498 195 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 ANXA8P13928 327 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 HSD3B1P14060 373 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 ENGP17813 658 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 HSD3B2P26439 372 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 S100A5P33763 92 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 PCGF2P35227 344 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 LIPAP38571 399 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 NSG1P42857 185 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 GDF5P43026 501 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 WNT3P56703 355 aa14.76□□□□□ -0.05
C9orf3-204ENST00000424143 LSM3P62310 102 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms