RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 FIGLAQ6QHK4 219 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 SNX31Q8N9S9 440 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 CCDC63Q8NA47 563 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 NEIL2Q969S2 332 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 DPH7Q9BTV6 452 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 C1QTNF3Q9BXJ4 246 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 CHRNA10Q9GZZ6 450 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 SOHLH2Q9NX45 425 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 ANKMY1Q9P2S6 941 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 COPG2Q9UBF2 871 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 OPTCQ9UBM4 332 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 DYRK1BQ9Y463 629 aa16.34■□□□□ 0.21
COL7A1-202ENST00000422991 CCDC187A0A096LP49 1063 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 OR2A25A4D2G3 310 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 E2F3O00716 465 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 TM9SF1O15321 606 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 PRAMEF10O60809 474 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 ZWINTO95229 277 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 CDH1P12830 882 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 CPA3P15088 417 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 EPORP19235 508 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 CSTF2P33240 577 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL7A1-202ENST00000422991 MLLT3P42568 568 aaPredicted RBP16.33■□□□□ 0.2
COL7A1-202ENST00000422991 ETV4P43268 484 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 PRKAA2P54646 552 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 HERVK_113P63132 956 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 MPP2Q14168 576 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 PCLAFQ15004 111 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 FCRL6Q6DN72 434 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 PAQR7Q86WK9 346 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 MARCH9Q86YJ5 346 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 SLC22A9Q8IVM8 553 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 D2HGDHQ8N465 521 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 AGBL5Q8NDL9 886 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 SLC5A11Q8WWX8 675 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 CCDC126Q96EE4 140 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 TCTN2Q96GX1 697 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 TMEM237Q96Q45 408 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 PLCD4Q9BRC7 762 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 SCNM1Q9BWG6 230 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 ERVK-6Q9BXR3 956 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 SIDT1Q9NXL6 827 aaKnown RBP16.33■□□□□ 0.2
COL7A1-202ENST00000422991 GPRC5BQ9NZH0 403 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 PCTPQ9UKL6 214 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 KCNE2Q9Y6J6 123 aa16.33■□□□□ 0.2
COL7A1-202ENST00000422991 TMEM120BA0PK00 339 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 HMGB1P1B2RPK0 211 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-202ENST00000422991 E7EQ34 232 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 HYAL3O43820 417 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-202ENST00000422991 NRP2O60462 931 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 HRH2P25021 359 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 PIK3CGP48736 1102 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 ARL4DP49703 201 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 EIF3IQ13347 325 aaKnown RBP16.32■□□□□ 0.2
COL7A1-202ENST00000422991 KCNAB1Q14722 419 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 ZNF678Q5SXM1 525 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 FRYQ5TBA9 3013 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 GOLGA7Q7Z5G4 137 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 TEX9Q8N6V9 391 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 ABHD11Q8NFV4 315 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 ZNF483Q8TF39 744 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-202ENST00000422991 ZUFSPQ96AP4 578 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 L3HYPDHQ96EM0 354 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 PELI2Q9HAT8 420 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 FAM60AQ9NP50 221 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 PDE7BQ9NP56 450 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 KCNK9Q9NPC2 374 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 TMEM184CQ9NVA4 438 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 OXSMQ9NWU1 459 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 AKAP7Q9P0M2 348 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-202ENST00000422991 SNX7Q9UNH6 387 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 LOXL2Q9Y4K0 774 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 NEUROG3Q9Y4Z2 214 aa16.32■□□□□ 0.2
COL7A1-202ENST00000422991 KNTC1P50748 2209 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 A0A1W2PNU3 283 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-202ENST00000422991 H7BY64 318 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 AGRPO00253 132 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 CTSVO60911 334 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 EBLN1P0CF75 366 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 EPB42P16452 691 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 GNAZP19086 355 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 SPINK2P20155 84 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 IMPDH1P20839 514 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 CCR8P51685 355 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 SLC18A1P54219 525 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 DNAJB13P59910 316 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 SH3BP2P78314 561 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 CSNK1G2P78368 415 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 GTF2H2Q13888 395 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 CATSPEREQ5SY80 951 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 GTF2H2CQ6P1K8 395 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 NXPE4Q6UWF7 544 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 SLCO4C1Q6ZQN7 724 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 RNF44Q7L0R7 432 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 RAB11FIP2Q7L804 512 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 TMPRSS11BQ86T26 416 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 C10orf107Q8IVU9 208 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 BMPERQ8N8U9 685 aa16.31■□□□□ 0.2
COL7A1-202ENST00000422991 OR4K1Q8NGD4 311 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms