RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PTCHD3Q3KNS1 767 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 PRAMEF17Q5VTA0 474 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 EMBQ6PCB8 327 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 LCTLQ6UWM7 567 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 ISCA2Q86U28 154 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 TCAIMQ8N3R3 496 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 ESX1Q8N693 406 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 NKD1Q969G9 470 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 SCYL1Q96KG9 808 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 DHRS4Q9BTZ2 278 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 SGPP1Q9BX95 441 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 ACTR5Q9H9F9 607 aaPredicted RBP15.12■□□□□ 0.01
BRAT1-202ENST00000421712 ANKMY1Q9P2S6 941 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 FETUBQ9UGM5 382 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 DYRK1BQ9Y463 629 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 TMEM184BQ9Y519 407 aaPredicted RBP15.12■□□□□ 0.01
BRAT1-202ENST00000421712 A0A087WV48 116 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 SYCE1LA8MT33 242 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 ZNF749O43361 778 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 CTSVO60911 334 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 CPNE3O75131 537 aaKnown RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 WDR47O94967 919 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 KLK3P07288 261 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 TUBBP07437 444 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 CDH1P12830 882 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 NPPBP16860 134 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 HRH2P25021 359 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 ITPKBP27987 946 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 SLCO1A2P46721 670 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 VSX2P58304 361 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 IFFO1Q0D2I5 559 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 NAA30Q147X3 362 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 ACAP2Q15057 778 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 C18orf21Q32NC0 220 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 SULT1C3Q6IMI6 304 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 FBXO42Q6P3S6 717 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 TLDC1Q6P9B6 456 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 TIPARPQ7Z3E1 657 aaKnown RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 VASH2Q86V25 355 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 THOC6Q86W42 341 aaKnown RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 DTX1Q86Y01 620 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 CENPLQ8N0S6 344 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 ZNF655Q8N720 491 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 AENQ8WTP8 325 aaKnown RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 RERGQ96A58 199 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 RHBDF1Q96CC6 855 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 CABS1Q96KC9 395 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 ZFYVE21Q9BQ24 234 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 CNOT10Q9H9A5 744 aaKnown RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 STARD5Q9NSY2 213 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 TMEM184CQ9NVA4 438 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 CUEDC1Q9NWM3 386 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-202ENST00000421712 PADI1Q9ULC6 663 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 SLC22A14Q9Y267 594 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 AP1M2Q9Y6Q5 423 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 IGF2RP11717 2491 aa15.11■□□□□ 0.01
BRAT1-202ENST00000421712 AHCTF1Q8WYP5 2266 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 IGKV1-8A0A0C4DH67 115 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 TLDC2A0PJX2 215 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 OR2A25A4D2G3 310 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 UBXN8O00124 270 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 ZSCAN9O15535 394 aaPredicted RBP15.1■□□□□ 0.01
BRAT1-202ENST00000421712 NRP2O60462 931 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 SRPX2O60687 465 aaPredicted RBP15.1■□□□□ 0.01
BRAT1-202ENST00000421712 KERAO60938 352 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 DLGAP3O95886 979 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 CTSBP07858 339 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 HBQ1P09105 142 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 ALAS2P22557 587 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 GRK3P35626 688 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 GDF5P43026 501 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 GABRA4P48169 554 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 KCNC1P48547 511 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 COL9A2Q14055 689 aaPredicted RBP15.1■□□□□ 0.01
BRAT1-202ENST00000421712 ZXDCQ2QGD7 858 aaPredicted RBP15.1■□□□□ 0.01
BRAT1-202ENST00000421712 FBXO48Q5FWF7 155 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 TCTE1Q5JU00 501 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 C19orf48Q6RUI8 117 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 PAQR7Q86WK9 346 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 PLD6Q8N2A8 252 aaKnown RBP15.1■□□□□ 0.01
BRAT1-202ENST00000421712 TTC29Q8NA56 475 aaPredicted RBP15.1■□□□□ 0.01
BRAT1-202ENST00000421712 MR1Q95460 341 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 CAVIN3Q969G5 261 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 KIAA1143Q96AT1 154 aaPredicted RBP15.1■□□□□ 0.01
BRAT1-202ENST00000421712 CCNL2Q96S94 520 aaPredicted RBP15.1■□□□□ 0.01
BRAT1-202ENST00000421712 NDC1Q9BTX1 674 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 SPRY4Q9C004 299 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 TXLNGQ9NUQ3 528 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 PCMTD2Q9NV79 361 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 SH2B3Q9UQQ2 575 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 PCDHB3Q9Y5E6 796 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 KLK4Q9Y5K2 254 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 KCNE2Q9Y6J6 123 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 HEATR5BQ9P2D3 2071 aa15.1■□□□□ 0.01
BRAT1-202ENST00000421712 MAP1BP46821 2468 aaKnown RBP15.09■□□□□ 0.01
BRAT1-202ENST00000421712 HAT1O14929 419 aa15.09■□□□□ 0.01
BRAT1-202ENST00000421712 CCNT2O60583 730 aaKnown RBP15.09■□□□□ 0.01
BRAT1-202ENST00000421712 COL6A2P12110 1019 aa15.09■□□□□ 0.01
BRAT1-202ENST00000421712 GFAPP14136 432 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms