RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 RGS9BPQ6ZS82 235 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ANO5Q75V66 913 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TRMT10CQ7L0Y3 403 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ARPINQ7Z6K5 226 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SATL1Q86VE3 508 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ECHDC2Q86YB7 292 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 HACE1Q8IYU2 909 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ELMOD1Q8N336 334 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 MARVELD2Q8N4S9 558 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 LSMEM1Q8N8F7 131 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CADM4Q8NFZ8 388 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CREB3L4Q8TEY5 395 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 PEX13Q92968 403 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TMA16Q96EY4 203 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 METTL2AQ96IZ6 378 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 COG3Q96JB2 828 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 DNAJC1Q96KC8 554 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SPATA17Q96L03 361 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 HARBI1Q96MB7 349 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 PPM1MQ96MI6 270 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TCEANC2Q96MN5 208 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SERPINB12Q96P63 405 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 PSKH2Q96QS6 385 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TGS1Q96RS0 853 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 DHRS9Q9BPW9 319 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 FERMT1Q9BQL6 677 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 BTBD10Q9BSF8 475 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 PITPNM3Q9BZ71 974 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TXLNGYQ9BZA5 131 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 EDEM3Q9BZQ6 932 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 NT5C3AQ9H0P0 336 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 AZI2Q9H6S1 392 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZNF696Q9H7X3 374 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 BRF2Q9HAW0 419 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 DDX18Q9NVP1 670 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TAB2Q9NYJ8 693 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 EHD2Q9NZN4 543 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 DBF4Q9UBU7 674 aaPredicted RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 MALT1Q9UDY8 824 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SIX4Q9UIU6 781 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TSPYL4Q9UJ04 414 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 HAO1Q9UJM8 370 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TMCC3Q9ULS5 477 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 EXOC7Q9UPT5 735 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CAMK2AQ9UQM7 478 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 VDAC3Q9Y277 283 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TDRKHQ9Y2W6 561 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 LSM4Q9Y4Z0 139 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ARHGAP23Q9P227 1491 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 N4BP2Q86UW6 1770 aaPredicted RBP3.28□□□□□ -1.89
SDCBPP3-201ENST00000419629 FRMPD4Q14CM0 1322 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 STK36Q9NRP7 1315 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MED1Q15648 1581 aaPredicted RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 A0A0D9SFI3 127 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 A0A1W2PPH5 198 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMEM120BA0PK00 339 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CPED1A4D0V7 1026 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM172BPA6NC97 362 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 EVPLLA8MZ36 301 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 J3KR12 359 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 PSMA7O14818 248 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CASQ2O14958 399 aaPredicted RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAGEB2O15479 319 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAGEB3O15480 346 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 POLR2DO15514 142 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 AQP9O43315 295 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 TNFSF14O43557 240 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 RNASEH1O60930 286 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 NOL3O60936 208 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 AGR2O95994 175 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 FYNP06241 537 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ATP5BP06576 529 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 UMODP07911 640 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SMIM18P0DKX4 95 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CALM1P0DP23 149 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CALM2P0DP24 149 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CALM3P0DP25 149 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SRCP12931 536 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 P4HA1P13674 534 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 VCLP18206 1134 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 EDN2P20800 178 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 JAK1P23458 1154 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ANXA13P27216 316 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CSTF2P33240 577 aaKnown RBP eCLIP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 LONP1P36776 959 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 GNL1P36915 607 aaPredicted RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAGEA1P43355 309 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 DRG2P55039 364 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 C21orf59P57076 290 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAP3K7CLP57077 242 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 GNG2P59768 71 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 DSTNP60981 165 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 B2MP61769 119 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ESRRGP62508 458 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SORDQ00796 357 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 DLG1Q12959 904 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 NAE1Q13564 534 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 PDE1CQ14123 709 aaPredicted RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAPRE2Q15555 327 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 901.3 ms