RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ILF2Q12905 390 aaKnown RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 NAE1Q13564 534 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 SOWAHCQ53LP3 525 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 DPY19L3Q6ZPD9 716 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 HIPK1Q86Z02 1210 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 PSMA8Q8TAA3 256 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 NELL1Q92832 810 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 TMEM169Q96HH4 297 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 ZNF641Q96N77 438 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 CWH43Q9H720 699 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 B4GALT6Q9UBX8 382 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 LOC100506127A0A0U1RQW1 187 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 GNG14A0A1W2PPG7 69 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 FAM220BPB1ANY3 271 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 E7EQ34 232 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 FABP3P05413 133 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 HPCAL1P37235 193 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 MAGEA10P43363 369 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 PPP3CCP48454 512 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 EIF2B2P49770 351 aaKnown RBP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 SEPHS1P49903 392 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 CREMQ03060 361 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 MVKQ03426 396 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 IER5LQ5T953 404 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 FRG2Q64ET8 278 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 PAGE2Q7Z2X7 111 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 OR4K1Q8NGD4 311 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 OR2AP1Q8NGE2 309 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 OR5AK3PQ8NH89 298 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 FRG2BQ96QU4 278 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ITM2CQ9NQX7 267 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ACSL6Q9UKU0 697 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ERGIC3Q9Y282 383 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 PCDHGA10Q9Y5H3 936 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 A0A096LPI6 279 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 CLDN25C9JDP6 229 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 INHAP05111 366 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 HSMCR30P0CW71 290 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 PCMT1P22061 227 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 AOAHP28039 575 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 CST5P28325 142 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 C21orf33P30042 268 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 BDKRB1P46663 353 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 NRIP1P48552 1158 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 MEF2AQ02078 507 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 PTSQ03393 145 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 UGT8Q16880 541 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 PLEKHG6Q3KR16 790 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ATG9BQ674R7 924 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 Q6ZVL8 140 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 DSG4Q86SJ6 1040 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 P2RY8Q86VZ1 359 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 UTP15Q8TED0 518 aaKnown RBP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 IGSF21Q96ID5 467 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 BRD9Q9H8M2 597 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 THUMPD1Q9NXG2 353 aaKnown RBP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 SCN3BQ9NY72 215 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 TRBV5-3A0A0A0MS03 114 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 MAGEB17A8MXT2 336 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 OR56A5P0C7T3 313 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 JUNBP17275 347 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 KRT20P35900 424 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 IFITM3Q01628 133 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ACSM2AQ08AH3 577 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ABHD18Q0P651 414 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ACSM2BQ68CK6 577 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 PLD3Q8IV08 490 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 PJA1Q8NG27 643 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 HTRA1Q92743 480 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 RNF167Q9H6Y7 350 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 REEP1Q9H902 201 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ABCB10Q9NRK6 738 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ZDHHC3Q9NYG2 299 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ZNF229Q9UJW7 825 aa11.53□□□□□ -0.56
LIMK1-202ENST00000418310 ADAM23O75077 832 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 ETHE1O95571 254 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 RETP07949 1114 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 DBTP11182 482 aaKnown RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 AMD1P17707 334 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 CD22P20273 847 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 RPS3P23396 243 aaKnown RBP eCLIP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 KDELR2P33947 212 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 CRATP43155 626 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 CLK1P49759 484 aaKnown RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 EPS8Q12929 822 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 SLC13A2Q13183 592 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 GBX1Q14549 363 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 CLCA4Q14CN2 919 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 VMACQ2NL98 169 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 UAP1L1Q3KQV9 507 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 MACC1Q6ZN28 852 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 LSRQ86X29 649 aaPredicted RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 CHPFQ8IZ52 775 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 C1orf52Q8N6N3 182 aaKnown RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 TRUB1Q8WWH5 349 aaKnown RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 ASPSCR1Q9BZE9 553 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 C6orf62Q9GZU0 229 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms