RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ZFP3Q96NJ6 502 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 NMUR2Q9GZQ4 415 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF180Q9UJW8 692 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 FBXO9Q9UK97 447 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 HCN2Q9UL51 889 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 OR14I1A6ND48 311 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SCELO95171 688 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 HCKP08631 526 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CSTF1Q05048 431 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SLC5A9Q2M3M2 681 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 HPS1Q92902 700 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 COL21A1Q96P44 957 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CMKLR1Q99788 373 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 THUMPD1Q9NXG2 353 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CNTN3Q9P232 1028 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SCML2Q9UQR0 700 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 MEMO1Q9Y316 297 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 TCRBV7S2A1N4TA0A589 114 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 GPIP06744 558 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 PCSK2P16519 638 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SOWAHAQ2M3V2 549 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 ALG10Q5BKT4 473 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 HSDL2Q6YN16 418 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 YIPF7Q8N8F6 280 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 ROPN1LQ96C74 230 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CAMK1GQ96NX5 476 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 GORASP1Q9BQQ3 440 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 PTGES2Q9H7Z7 377 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 C12orf4Q9NQ89 552 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 FAM149AA5PLN7 773 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 A6NCN8 305 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 POP7O75817 140 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SCGB1D2O95969 90 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CHRNA4P43681 627 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 HERVK_113P63132 956 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 LRP8Q14114 963 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF234Q14588 700 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 PRRT3Q5FWE3 981 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 ANKRD22Q5VYY1 191 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 THOC7Q6I9Y2 204 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 ADGRD1Q6QNK2 874 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SSX6Q7RTT6 188 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CPNE2Q96FN4 548 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 ERVK-6Q9BXR3 956 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 NUSAP1Q9BXS6 441 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 KCNH6Q9H252 994 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 Q9N2J8 555 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 FAM221BA6H8Z2 402 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 LAMTOR5O43504 91 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 NPHS1O60500 1241 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CYP11A1P05108 521 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 BDKRB1P46663 353 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 IDH3AP50213 366 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SLC22A8Q8TCC7 542 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SLC32A1Q9H598 525 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 PARPBPQ9NWS1 579 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 DTLQ9NZJ0 730 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CCDC59Q9P031 241 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 E7EQ34 232 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 BLOC1S5-TXNDC5H3BN57 136 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 NUAK1O60285 661 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 RLN2P04090 185 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ETS2P15036 469 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 EDNRAP25101 427 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 MSX1P28360 303 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 DLK2Q6UY11 383 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ABHD5Q8WTS1 349 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 SLC13A3Q8WWT9 602 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 CHIAQ9BZP6 476 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 CNTN6Q9UQ52 1028 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 KCNK6Q9Y257 313 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 EVPLQ92817 2033 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ADGRB1O14514 1584 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 HSPA12AO43301 675 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 SNHG28P0DPA3 235 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PAX7P23759 505 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 IRF9Q00978 393 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 LRRC66Q68CR7 880 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 SLC25A25Q6KCM7 469 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 OR2AP1Q8NGE2 309 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 EZH1Q92800 747 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PCDHGB1Q9Y5G3 927 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PPEF2O14830 753 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 BCHEP06276 602 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 APLP1P51693 650 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 DSTNP60981 165 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 HGSNATQ68CP4 663 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PDE12Q6L8Q7 609 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 CTU1Q7Z7A3 348 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 OR6N1Q8NGY5 312 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 BRI3BPQ8WY22 251 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 TOP1MTQ969P6 601 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 AIFM2Q9BRQ8 373 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 EIF2B3Q9NR50 452 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 FLRT1Q9NZU1 646 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PPM1HQ9ULR3 514 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 GPR89AB7ZAQ6 455 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 AIREO43918 545 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms