RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 VILLO15195 856 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 GYG2O15488 501 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 KRT34O76011 436 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 XRCC1P18887 633 aaPredicted RBP20.04■□□□□ 0.8
CASC3-203ENST00000418132 GPX3P22352 226 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 PRPH2P23942 346 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 CSTF3Q12996 717 aaKnown RBP20.04■□□□□ 0.8
CASC3-203ENST00000418132 GRIK2Q13002 908 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 SLBPQ14493 270 aaKnown RBP eCLIP20.04■□□□□ 0.8
CASC3-203ENST00000418132 RFTN2Q52LD8 501 aaPredicted RBP20.04■□□□□ 0.8
CASC3-203ENST00000418132 PRRT3Q5FWE3 981 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 PAGE2BQ5JRK9 111 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 MAML2Q8IZL2 1156 aaPredicted RBP20.04■□□□□ 0.8
CASC3-203ENST00000418132 OR7G3Q8NG95 312 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 ZFPM2Q8WW38 1151 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 BRINP2Q9C0B6 783 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 THADAQ6YHU6 1953 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 TRBV23OR9-2A0A075B6M9 112 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 KIR2DS5A0A0G2JLQ3 304 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 A0A0G2JNG1 304 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 TMEM221A6NGB7 291 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 KIR2DS3K7RE56 304 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 M0R296 226 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 GSC2O15499 205 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 RSL1D1O76021 490 aaKnown RBP20.03■□□□□ 0.8
CASC3-203ENST00000418132 CDH1P12830 882 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 SHMT2P34897 504 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 C1orf61Q13536 156 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 LAPTM5Q13571 262 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 KIR2DS5Q14953 304 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 KIF19Q2TAC6 998 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 C10orf62Q5T681 223 aaPredicted RBP20.03■□□□□ 0.8
CASC3-203ENST00000418132 MED27Q6P2C8 311 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 ARMCX6Q7L4S7 300 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 FAM129CQ86XR2 697 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 C1orf210Q8IVY1 113 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 LAS2Q8IYD9 372 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 OR2A1Q8NGT9 310 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 PELI2Q9HAT8 420 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 LRTM1Q9HBL6 345 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 OR6C2Q9NZP2 312 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 SPAG17Q6Q759 2223 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 TDRD6O60522 2096 aaKnown RBP20.03■□□□□ 0.8
CASC3-203ENST00000418132 B2RBV5 119 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 BCAT2O15382 392 aaPredicted RBP20.03■□□□□ 0.8
CASC3-203ENST00000418132 PRICKLE3O43900 615 aaPredicted RBP20.03■□□□□ 0.8
CASC3-203ENST00000418132 HSD3B1P14060 373 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 HSD3B2P26439 372 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 PSMB5P28074 263 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 YBX1P67809 324 aaKnown RBP20.03■□□□□ 0.8
CASC3-203ENST00000418132 ZFAND4Q86XD8 727 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 SNX32Q86XE0 403 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 MIER2Q8N344 545 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 ABHD11Q8NFV4 315 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 REPS1Q96D71 796 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 C1orf50Q9BV19 199 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 POT1Q9NUX5 634 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 C1orf109Q9NX04 203 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 PCDHB11Q9Y5F2 797 aa20.03■□□□□ 0.8
CASC3-203ENST00000418132 ZDBF2Q9HCK1 2354 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 PIPSLA2A3N6 862 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 SLC2A4P14672 509 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 CSNK1EP49674 416 aaKnown RBP20.02■□□□□ 0.8
CASC3-203ENST00000418132 AFF3P51826 1226 aaKnown RBP20.02■□□□□ 0.8
CASC3-203ENST00000418132 UBE2IP63279 158 aaKnown RBP20.02■□□□□ 0.8
CASC3-203ENST00000418132 PRDX1Q06830 199 aaKnown RBP20.02■□□□□ 0.8
CASC3-203ENST00000418132 MAD2L1Q13257 205 aaPredicted RBP20.02■□□□□ 0.8
CASC3-203ENST00000418132 CYLC2Q14093 348 aaPredicted RBP20.02■□□□□ 0.8
CASC3-203ENST00000418132 KIAA0040Q15053 153 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 HIST2H2ACQ16777 129 aaPredicted RBP20.02■□□□□ 0.8
CASC3-203ENST00000418132 AGKQ53H12 422 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 ICE2Q659A1 982 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 HIST2H2AA3Q6FI13 130 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 AMIGO1Q86WK6 493 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 NAGSQ8N159 534 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 LCN9Q8WX39 176 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 PATE1Q8WXA2 126 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 TWSG1Q9GZX9 223 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 C1orf21Q9H246 121 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 SPNS1Q9H2V7 528 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 BRF2Q9HAW0 419 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 NOP53Q9NZM5 478 aaKnown RBP20.02■□□□□ 0.8
CASC3-203ENST00000418132 TSC22D4Q9Y3Q8 395 aa20.02■□□□□ 0.8
CASC3-203ENST00000418132 RPL38P63173 70 aaKnown RBP20.01■□□□□ 0.79
CASC3-203ENST00000418132 RPS6KA2Q15349 733 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 ELOCQ15369 112 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 MAPRE2Q15555 327 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 PAOXQ6QHF9 649 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 C11orf74Q86VG3 221 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 FBXO27Q8NI29 283 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 MTERF1Q99551 399 aaKnown RBP20.01■□□□□ 0.79
CASC3-203ENST00000418132 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.01■□□□□ 0.793e-6■■■□□ 15
CASC3-203ENST00000418132 CUEDC1Q9NWM3 386 aaPredicted RBP20.01■□□□□ 0.79
CASC3-203ENST00000418132 ASIC5Q9NY37 505 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 CCDC167Q9P0B6 97 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 CPNE7Q9UBL6 633 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 SEC22BO75396 215 aa20.01■□□□□ 0.79
CASC3-203ENST00000418132 CSTF1Q05048 431 aaKnown RBP20.01■□□□□ 0.79
CASC3-203ENST00000418132 PDCD4Q53EL6 469 aaKnown RBP20.01■□□□□ 0.79
CASC3-203ENST00000418132 IL23RQ5VWK5 629 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms