RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 RIBC1Q8N443 379 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ARL14EPQ8N8R7 260 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 DNAAF3Q8N9W5 541 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 LEMD2Q8NC56 503 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 HJURPQ8NCD3 748 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 MCUQ8NE86 351 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ASB12Q8WXK4 309 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 LRRC39Q96DD0 335 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATP6V1G3Q96LB4 118 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 C1orf74Q96LT6 269 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 AGAP3Q96P47 875 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 SERPINB12Q96P63 405 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 GPR78Q96P69 363 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 SH3GL2Q99962 352 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 TXLNGYQ9BZA5 131 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC39A8Q9C0K1 460 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 GBA3Q9H227 469 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 PPCSQ9HAB8 311 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMBIM4Q9HC24 238 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF334Q9HCZ1 680 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 EIF2B3Q9NR50 452 aaKnown RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMEM248Q9NWD8 314 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 MPP6Q9NZW5 540 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 IGSF9Q9P2J2 1179 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 CPQQ9Y646 472 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 MAD1L1Q9Y6D9 718 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 IKBKGQ9Y6K9 419 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 C2orf16Q68DN1 1984 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 CHD5Q8TDI0 1954 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 IGLV3-10A0A075B6K4 115 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 GOLGA6L7A0A1B0GV03 622 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 A0A1B0GVM2 712 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TCRBV7S3A2A0A539 114 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ERI2A8K979 691 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 HIDE1A8MVS5 230 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 E7ESA3 106 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 C5orf67F2Z3F1 127 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 AP3B1O00203 1094 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TLX3O43711 291 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TBL1XO60907 577 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CDH16O75309 829 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ANXA9O76027 345 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CNTN5O94779 1100 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 EPN2O95208 641 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 AP2A1O95782 977 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 OAS1P00973 400 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 AGTP01019 485 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 JCHAINP01591 159 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 HLA-DQB2P05538 268 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CA3P07451 260 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 INHBAP08476 426 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 GSTA2P09210 222 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 LINC00271P0C7V0 271 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 MLNP12872 115 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CCNB1P14635 433 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 GJA1P17302 382 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PTPN2P17706 415 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PGAM1P18669 254 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TNFSF4P23510 183 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 SSTR1P30872 391 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 AVPR1AP37288 418 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ELK3P41970 407 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 MAGEA6P43360 314 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PAPOLAP51003 745 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CLCN4P51793 760 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CDH4P55283 916 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 GEMIN4P57678 1058 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 GNGT1P63211 74 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 IFI35P80217 286 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 IL10RBQ08334 325 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 DMWDQ09019 674 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 WASHC5Q12768 1159 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZBTB17Q13105 803 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF177Q13360 481 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 GPM6BQ13491 265 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CDH18Q13634 790 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 FASTKD3Q14CZ7 662 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 RAB30Q15771 203 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 MAPKAPK3Q16644 382 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PARP15Q460N3 678 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TEX44Q53QW1 395 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ALFQ53S48 1182 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 C6orf10Q5SRN2 563 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 FNBP1LQ5T0N5 605 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 MARC1Q5VT66 337 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TXNDC8Q6A555 127 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 NADSYN1Q6IA69 706 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 FBXL22Q6P050 247 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 RFWD3Q6PCD5 774 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 C16orf89Q6UX73 402 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CHST9Q7L1S5 443 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 LINC00523Q86TU6 105 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 LRRC49Q8IUZ0 686 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARHGAP12Q8IWW6 846 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CTAGE3PQ8IX95 158 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 IQCKQ8N0W5 287 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PELI3Q8N2H9 469 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CARNMT1Q8N4J0 409 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PAF1Q8N7H5 531 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms