RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 CPNE3O75131 537 aaKnown RBP11.97□□□□□ -0.49
SKA1-203ENST00000417656 SUPT3HO75486 399 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 NTRK1P04629 796 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 SNRPAP09012 282 aaKnown RBP11.97□□□□□ -0.49
SKA1-203ENST00000417656 CCND1P24385 295 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 SLCO1A2P46721 670 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 ABATP80404 500 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 SRSF6Q13247 344 aaKnown RBP11.97□□□□□ -0.49
SKA1-203ENST00000417656 PTCHD3Q3KNS1 767 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 FBXO48Q5FWF7 155 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 ZNF425Q6IV72 752 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 LCTLQ6UWM7 567 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 TIPARPQ7Z3E1 657 aaKnown RBP11.97□□□□□ -0.49
SKA1-203ENST00000417656 ISCA2Q86U28 154 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 VASH2Q86V25 355 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 BPHLQ86WA6 291 aaPredicted RBP11.97□□□□□ -0.49
SKA1-203ENST00000417656 DTX1Q86Y01 620 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 MCATQ8IVS2 390 aaKnown RBP11.97□□□□□ -0.49
SKA1-203ENST00000417656 PLD6Q8N2A8 252 aaKnown RBP11.97□□□□□ -0.49
SKA1-203ENST00000417656 GALNT6Q8NCL4 622 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 PDPRQ8NCN5 879 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 OR2W6PQ8NHA6 318 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 EPS8L3Q8TE67 593 aaKnown RBP11.97□□□□□ -0.49
SKA1-203ENST00000417656 RHBDF1Q96CC6 855 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 OR4K3Q96R72 315 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 ATOH8Q96SQ7 321 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 CCDC77Q9BR77 488 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 PLCD4Q9BRC7 762 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 SPRY4Q9C004 299 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 PCBD2Q9H0N5 130 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 SYNPO2LQ9H987 977 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 PCMTD2Q9NV79 361 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 WWOXQ9NZC7 414 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 NUDT4Q9NZJ9 180 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 CD274Q9NZQ7 290 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 TBK1Q9UHD2 729 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 PILRAQ9UKJ1 303 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 RAB21Q9UL25 225 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 HEATR5BQ9P2D3 2071 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 AHCTF1Q8WYP5 2266 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 A0A087WV48 116 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 IQANK1A0A1B0GTG1 560 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 TARM1B6A8C7 271 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 E7EQ34 232 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 H3BMH7 237 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 H7BY64 318 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 HAT1O14929 419 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 OR2B3O76000 313 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 WDR47O94967 919 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 KLHL2O95198 593 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 S100BP04271 92 aaPredicted RBP11.96□□□□□ -0.49
SKA1-203ENST00000417656 CDH1P12830 882 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 ITPKBP27987 946 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 SLC6A12P48065 614 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 KCNC1P48547 511 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 HNMTP50135 292 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 ATP1A2P50993 1020 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 FAM83EQ2M2I3 478 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 TECRLQ5HYJ1 363 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 ZC3H12BQ5HYM0 836 aaKnown RBP11.96□□□□□ -0.49
SKA1-203ENST00000417656 LGSNQ5TDP6 509 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 FRMPD2BQ6IN97 320 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 LRRC69Q6ZNQ3 347 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 C17orf64Q86WR6 236 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 PLD3Q8IV08 490 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 GPR135Q8IZ08 494 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 CACNA2D3Q8IZS8 1091 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 NLGN4XQ8N0W4 816 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 NLGN4YQ8NFZ3 816 aaPredicted RBP11.96□□□□□ -0.49
SKA1-203ENST00000417656 STAG3L4Q8TBR4 150 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 MZB1Q8WU39 189 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 NKD1Q969G9 470 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 ZUFSPQ96AP4 578 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 MTBPQ96DY7 904 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 TSNARE1Q96NA8 513 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 PRAP1Q96NZ9 151 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 GPR78Q96P69 363 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 ZFYVE21Q9BQ24 234 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 SELENOSQ9BQE4 189 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 HAUS8Q9BT25 410 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 SPRTNQ9H040 489 aaPredicted RBP11.96□□□□□ -0.49
SKA1-203ENST00000417656 RRAGDQ9NQL2 400 aaPredicted RBP11.96□□□□□ -0.49
SKA1-203ENST00000417656 ZNF358Q9NW07 568 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 SERTAD3Q9UJW9 196 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 PCDHB3Q9Y5E6 796 aa11.96□□□□□ -0.49
SKA1-203ENST00000417656 DMXL2Q8TDJ6 3036 aa11.96□□□□□ -0.5
SKA1-203ENST00000417656 SPTBP11277 2137 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 FER1L5A0AVI2 2057 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 LOC105369274A0A096LPK9 316 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 LOC102723532A0A0G2JNH3 316 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 TAPBPO15533 448 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 ZSCAN9O15535 394 aaPredicted RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 ZNF749O43361 778 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 RFPL1O75677 317 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 EZRP15311 586 aaKnown RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 NPPBP16860 134 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 GDF5P43026 501 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 HSPA7P48741 367 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 VSX2P58304 361 aaPredicted RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 CSNK1G2P78368 415 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms