RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 LOC105369274A0A096LPK9 316 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 LOC102723532A0A0G2JNH3 316 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 GLYATL1P3A0A0U1RQE8 302 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 TRIM64A6NGJ6 449 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 TRIM64BA6NI03 449 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 ISM1B1AKI9 464 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 IDSB3KWA1 339 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 LINC01387J3KSC0 135 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 CCL22O00626 93 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 PRRG2O14669 202 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 TTI1O43156 1089 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 CTSVO60911 334 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 PDE9AO76083 593 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 SEC24DO94855 1032 aaPredicted RBP8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 TSPAN12O95859 305 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 MSH3P20585 1137 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 CA4P22748 312 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 CES1P23141 567 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 CHRNB4P30926 498 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 CD68P34810 354 aaPredicted RBP8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 SERPINB6P35237 376 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 CARSP49589 748 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 CDKN1CP49918 316 aaPredicted RBP8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 EMP2P54851 167 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 OR1C1Q15619 314 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 LDLRAP1Q5SW96 308 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 ABHD17BQ5VST6 288 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 KDELC1Q6UW63 502 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 LANCL3Q6ZV70 420 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 NLRP9Q7RTR0 991 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 ZNF227Q86WZ6 799 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 PSTKQ8IV42 348 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 OR4N4Q8N0Y3 316 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 GHDCQ8N2G8 530 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 SUN3Q8TAQ9 357 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 FAM57AQ8TBR7 257 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 ZNF398Q8TD17 642 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 COX4I2Q96KJ9 171 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 MYO1AQ9UBC5 1043 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 TDRKHQ9Y2W6 561 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 ZNF407Q9C0G0 2248 aa8.17□□□□□ -1.1
NIF3L1-206ENST00000416651 KRT87PA6NCN2 255 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 NEURL1O76050 574 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 HMGCLP35914 325 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 GJC1P36383 396 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 RAB28P51157 221 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 VSX2P58304 361 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 NKX6-1P78426 367 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 DPYSL3Q14195 570 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 BRD3Q15059 726 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 BCL7AQ4VC05 210 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 SIRPB2Q5JXA9 342 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 SARM1Q6SZW1 724 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 ARSKQ6UWY0 536 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 NPNTQ6UXI9 565 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 HOOK3Q86VS8 718 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 CRLF3Q8IUI8 442 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 ELOA2Q8IYF1 753 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 LINC01555Q8NAE3 123 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 CCNYQ8ND76 341 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 HM13Q8TCT9 377 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 ASB5Q8WWX0 329 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 PHF3Q92576 2039 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 TFGQ92734 400 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 SLCO2A1Q92959 643 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 LINC00615Q96LM1 132 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 C10orf90Q96M02 699 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 IL17FQ96PD4 163 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 KRTAP4-9Q9BYQ8 210 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 CHRNA10Q9GZZ6 450 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 RASSF4Q9H2L5 321 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 ZNF304Q9HCX3 659 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 RAD18Q9NS91 495 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 PARVAQ9NVD7 372 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 TRPS1Q9UHF7 1281 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 GNPTGQ9UJJ9 305 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 CBLCQ9ULV8 474 aa8.16□□□□□ -1.1
NIF3L1-206ENST00000416651 A0A1W2PQ72 361 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 GOLGA6L4A6NEF3 574 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 CDC40O60508 579 aaKnown RBP eCLIP8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 NDST3O95803 873 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 WNT11O96014 354 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 RAF1P04049 648 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 CD53P19397 219 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 EEF1DP29692 281 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 PTGS2P35354 604 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 PCK1P35558 622 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 ZNF135P52742 658 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 ARSFP54793 590 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 FANCCQ00597 558 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 KRT81Q14533 505 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 TPD52L1Q16890 204 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 LONRF2Q1L5Z9 754 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 BOLA3Q53S33 107 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 ACER2Q5QJU3 275 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 WASHC2DQ5SRD0 308 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 CCDC122Q5T0U0 273 aa8.15□□□□□ -1.1
NIF3L1-206ENST00000416651 E4F1Q66K89 784 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms