RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GKP32189 559 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 MAN2A2P49641 1150 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 HTR6P50406 440 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 CLDN10P78369 228 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 RBM23Q86U06 439 aaKnown RBP12.58□□□□□ -0.4
SCN1B-202ENST00000415950 GPC2Q8N158 579 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 SVOPLQ8N434 492 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 ABHD11Q8NFV4 315 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 YIPF4Q9BSR8 244 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 CXCL16Q9H2A7 254 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 BEX1Q9HBH7 125 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 FAIMQ9NVQ4 179 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 C4AP0C0L4 1744 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 MT-ND2P03891 347 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 ENGP17813 658 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 CPN2P22792 545 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 FAUP35544 74 aaKnown RBP12.57□□□□□ -0.4
SCN1B-202ENST00000415950 CSTF1Q05048 431 aaKnown RBP12.57□□□□□ -0.4
SCN1B-202ENST00000415950 RGS1Q08116 209 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D25Q3MII6 688 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 CCSER2Q9H7U1 834 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 GRIP1Q9Y3R0 1128 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 ACTL7AQ9Y615 435 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 DCLK1O15075 740 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 SLC22A1O15245 554 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 KERAO60938 352 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 ATF6P18850 670 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 NT5EP21589 574 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 CSTF2P33240 577 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCN1B-202ENST00000415950 SWI5Q1ZZU3 235 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 RFTN2Q52LD8 501 aaPredicted RBP12.57□□□□□ -0.4
SCN1B-202ENST00000415950 OR2T5Q6IEZ7 315 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 NIPAL1Q6NVV3 410 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 OR2T29Q8NH02 315 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 C1QTNF1Q9BXJ1 281 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 GPN1Q9HCN4 374 aaPredicted RBP12.57□□□□□ -0.4
SCN1B-202ENST00000415950 DNAJC13O75165 2243 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 TRIM64CA6NLI5 447 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 BHMG1C9JSJ3 638 aaPredicted RBP12.57□□□□□ -0.4
SCN1B-202ENST00000415950 ACOX3O15254 700 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 PORP16435 677 aaPredicted RBP12.57□□□□□ -0.4
SCN1B-202ENST00000415950 NR4A2P43354 598 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF404Q494X3 552 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 SNAP47Q5SQN1 464 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF534Q76KX8 674 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 FAM217AQ8IXS0 508 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 OR10G2Q8NGC3 310 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 LGALS12Q96DT0 336 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 MRGPRX2Q96LB1 330 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 SMIM14Q96QK8 99 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 ACBD6Q9BR61 282 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 TTPALQ9BTX7 342 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 TTLL2Q9BWV7 592 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 MFSD1Q9H3U5 465 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 SLC22A14Q9Y267 594 aa12.57□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3DA0A087WVF3 549 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3IA0A087WXS9 549 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3EA0A087X179 549 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3KA0A087X1G2 549 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3FA6NER0 549 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3LB9A6J9 549 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 C1QTNF3-AMACRE9PGA6 284 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 I3L521 148 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 LDB2O43679 373 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3HP0C7X1 549 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 CD247P20963 164 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 CD47Q08722 323 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 STEAP4Q687X5 459 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3GQ6DHY5 549 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3CQ6IPX1 549 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 LYSMD3Q7Z3D4 306 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 SYVN1Q86TM6 617 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 IQCHQ86VS3 1027 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TBC1D3Q8IZP1 549 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TSEN15Q8WW01 171 aaKnown RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 POP5Q969H6 163 aaKnown RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 C5orf34Q96MH7 638 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 DUSP26Q9BV47 211 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 ZDHHC7Q9NXF8 308 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 GTF2IRD1Q9UHL9 959 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 PDPK1O15530 556 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 OR1F1O43749 312 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 SLC15A1P46059 708 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 OR4D1Q15615 310 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 WSCD2Q2TBF2 565 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 IQCCQ4KMZ1 466 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 RBM48Q5RL73 367 aaKnown RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF648Q5T619 568 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 MED27Q6P2C8 311 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 MBOAT1Q6ZNC8 495 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 LGI4Q8N135 537 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 SCML4Q8N228 414 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 WDR37Q9Y2I8 494 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 PRODHO43272 600 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 ATG13O75143 517 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 PFKMP08237 780 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 PRPS2P11908 318 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 ATP13A5Q4VNC0 1218 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms