RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 GBX1Q14549 363 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 BRD3Q15059 726 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 TMED2Q15363 201 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 KBTBD12Q3ZCT8 623 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 NKAIN1Q4KMZ8 207 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 DCAF10Q5QP82 559 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 IRAK1BP1Q5VVH5 260 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 PTRHD1Q6GMV3 140 aaKnown RBP16.05■□□□□ 0.16
SF1-207ENST00000413951 IGFL3Q6UXB1 125 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 UNC5DQ6UXZ4 953 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 ZC3HC1Q86WB0 502 aaKnown RBP16.05■□□□□ 0.16
SF1-207ENST00000413951 GALNT16Q8N428 558 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 CDKL2Q92772 493 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 PANX3Q96QZ0 392 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 EPB41L4BQ9H329 900 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 ATP13A2Q9NQ11 1180 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 PLEKHB1Q9UF11 243 aaPredicted RBP16.05■□□□□ 0.16
SF1-207ENST00000413951 CDYLQ9Y232 598 aa16.05■□□□□ 0.16
SF1-207ENST00000413951 IQCF5A8MTL0 148 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 H3BMH7 237 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 KPNA5O15131 536 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 NIPSNAP2O75323 286 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 GPC4O75487 556 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 ALBP02768 609 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 TUBBP07437 444 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 CBSLP0DN79 551 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 ITGAXP20702 1163 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 MCM3P25205 808 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 CBSP35520 551 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 GABRA4P48169 554 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 TIAL1Q01085 375 aaKnown RBP eCLIP16.04■□□□□ 0.161e-7■□□□□ 9.3
SF1-207ENST00000413951 TCTE1Q5JU00 501 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 C1orf189Q5VU69 101 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 MRPL14Q6P1L8 145 aaKnown RBP16.04■□□□□ 0.16
SF1-207ENST00000413951 TRIM73Q86UV7 250 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 DCUN1D3Q8IWE4 304 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 SLC22A15Q8IZD6 547 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 KRT222Q8N1A0 295 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 ZADH2Q8N4Q0 377 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 DNAJC22Q8N4W6 341 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 ZNF655Q8N720 491 aaPredicted RBP16.04■□□□□ 0.16
SF1-207ENST00000413951 RBMXL3Q8N7X1 1067 aaKnown RBP16.04■□□□□ 0.16
SF1-207ENST00000413951 AENQ8WTP8 325 aaKnown RBP16.04■□□□□ 0.16
SF1-207ENST00000413951 FKBP10Q96AY3 582 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 CYTH2Q99418 400 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 CPNE1Q99829 537 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 AARSD1Q9BTE6 412 aaKnown RBP16.04■□□□□ 0.16
SF1-207ENST00000413951 MFRPQ9BY79 579 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 SPRTNQ9H040 489 aaPredicted RBP16.04■□□□□ 0.16
SF1-207ENST00000413951 ILKAPQ9H0C8 392 aaPredicted RBP16.04■□□□□ 0.16
SF1-207ENST00000413951 RHOJQ9H4E5 214 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 P4HTMQ9NXG6 502 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 EURLQ9NYK6 297 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.04■□□□□ 0.16
SF1-207ENST00000413951 KLHL42Q9P2K6 505 aa16.04■□□□□ 0.16
SF1-207ENST00000413951 TCP11X1B4DZS4 312 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 PIAS1O75925 651 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 SLCO2B1O94956 709 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 ACSL3O95573 720 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 ALAS2P22557 587 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 PKLRP30613 574 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 CLCN7P51798 805 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 CSE1LP55060 971 aaKnown RBP16.03■□□□□ 0.16
SF1-207ENST00000413951 HSPA14Q0VDF9 509 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 AIMP2Q13155 320 aaKnown RBP16.03■□□□□ 0.16
SF1-207ENST00000413951 ELOAQ14241 798 aaKnown RBP16.03■□□□□ 0.16
SF1-207ENST00000413951 ZIC1Q15915 447 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 DEFB110Q30KQ9 67 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 STRA8Q7Z7C7 330 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 Q8NA96 180 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 GIMAP7Q8NHV1 300 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 WDR54Q9H977 334 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 SPHK1Q9NYA1 384 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 NXT1Q9UKK6 140 aaKnown RBP16.03■□□□□ 0.16
SF1-207ENST00000413951 SLC39A10Q9ULF5 831 aa16.03■□□□□ 0.16
SF1-207ENST00000413951 A0A1B0GX78 115 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 AGPSO00116 658 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 RIPK2O43353 540 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 ATP5DP30049 168 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 GP5P40197 560 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 GRM7Q14831 915 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 NAA25Q14CX7 972 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 EFTUD2Q15029 972 aaKnown RBP eCLIP16.02■□□□□ 0.163e-7■■■■■ 44.5
SF1-207ENST00000413951 FAM214AQ32MH5 1076 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 RBM20Q5T481 1227 aaKnown RBP16.02■□□□□ 0.16
SF1-207ENST00000413951 FAM69BQ5VUD6 431 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 EMBQ6PCB8 327 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 MCATQ8IVS2 390 aaKnown RBP16.02■□□□□ 0.16
SF1-207ENST00000413951 TTC29Q8NA56 475 aaPredicted RBP16.02■□□□□ 0.16
SF1-207ENST00000413951 FLVCR1-AS1Q8TAF5 88 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 PRR7Q8TB68 274 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 MAGEC3Q8TD91 643 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 ZUFSPQ96AP4 578 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 RBBP8Q99708 897 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 CCDC68Q9H2F9 335 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 AGPAT4Q9NRZ5 378 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 GALPQ9UBC7 116 aa16.02■□□□□ 0.16
SF1-207ENST00000413951 DHCR7Q9UBM7 475 aaKnown RBP16.02■□□□□ 0.16
SF1-207ENST00000413951 TARM1B6A8C7 271 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms