RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 GPR19Q15760 415 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 DEFB110Q30KQ9 67 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 CATSPEREQ5SY80 951 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 ADCK2Q7Z695 626 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 TCP10LQ8TDR4 215 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 ZUFSPQ96AP4 578 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 ARL8AQ96BM9 186 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 TCTN2Q96GX1 697 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 MDC1Q14676 2089 aaKnown RBP29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 G3V2L1 256 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 TYROBPO43914 113 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 JMJD7P0C870 316 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 MAPK10P53779 464 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 CCDC153Q494R4 210 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 SNX31Q8N9S9 440 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 CCDC63Q8NA47 563 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 PMEPA1Q969W9 287 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 PRR11Q96HE9 360 aaPredicted RBP29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 FCRL4Q96PJ5 515 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 OR6C1Q96RD1 312 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 APMAPQ9HDC9 416 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 ACSS2Q9NR19 701 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 DNAJC11Q9NVH1 559 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 DYRK1BQ9Y463 629 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 KLK4Q9Y5K2 254 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 CTSVO60911 334 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 TAC1P20366 129 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 EEF1DP29692 281 aaKnown RBP29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 GABREP78334 506 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 EIF3IQ13347 325 aaKnown RBP29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 ZNF425Q6IV72 752 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 ARMC2Q8NEN0 867 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 SLC5A11Q8WWX8 675 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 FAM111AQ96PZ2 611 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 CTRCQ99895 268 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 PLCD4Q9BRC7 762 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 OPTCQ9UBM4 332 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 KCNE2Q9Y6J6 123 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 SPTBP11277 2137 aa29.37■■■□□ 2.29
CSNK1E-206ENST00000413574 OR2A25A4D2G3 310 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 EPORP19235 508 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 CDC16Q13042 620 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 PAQR7Q86WK9 346 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 PLD3Q8IV08 490 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 MOCOSQ96EN8 888 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 RNF31Q96EP0 1072 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 TMCO1Q9UM00 188 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 NEUROG3Q9Y4Z2 214 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 FREM2Q5SZK8 3169 aa29.36■■■□□ 2.29
CSNK1E-206ENST00000413574 NCOR2Q9Y618 2525 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 E7EQ34 232 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 K7EPI3 171 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 MAP3K7O43318 606 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 CTSBP07858 339 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 ATP5F1P24539 256 aaPredicted RBP29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 MEF2AQ02078 507 aaPredicted RBP29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 PCBP2Q15366 365 aaKnown RBP eCLIP29.35■■■□□ 2.291e-6■■■■■ 27.4
CSNK1E-206ENST00000413574 PDK4Q16654 411 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 TMTC4Q5T4D3 741 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 RPS27LQ71UM5 84 aaKnown RBP29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 LRRC70Q7Z2Q7 622 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 DNAJC22Q8N4W6 341 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 TEX9Q8N6V9 391 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 STMN4Q9H169 189 aaPredicted RBP29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 SYNPO2LQ9H987 977 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 POLR1BQ9H9Y6 1135 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 FGF21Q9NSA1 209 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 SNX7Q9UNH6 387 aa29.35■■■□□ 2.29
CSNK1E-206ENST00000413574 TRABD2BA6NFA1 517 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 STX16-NPEPL1H3BU86 382 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 STX16O14662 325 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 HAT1O14929 419 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 GABRA4P48169 554 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 MAGOHP61326 146 aaKnown RBP29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 CSNK1G2P78368 415 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 MC2RQ01718 297 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 TUBB3Q13509 450 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 ZYG11AQ6WRX3 759 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 TMPRSS11BQ86T26 416 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 TLCD1Q96CP7 247 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 TMEM184CQ9NVA4 438 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 SLC39A1Q9NY26 324 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 MSRB2Q9Y3D2 182 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 TNPO3Q9Y5L0 923 aaKnown RBP29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 E2F3O00716 465 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 PRAMEF4O60810 478 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 TNFSF15O95150 251 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 MYL2P10916 166 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 NFKB2Q00653 900 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 COL9A2Q14055 689 aaPredicted RBP29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 PRAMEF9Q5VWM5 478 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 FBXO42Q6P3S6 717 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 SPNS1Q9H2V7 528 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 ACTL7BQ9Y614 415 aa29.34■■■□□ 2.29
CSNK1E-206ENST00000413574 FRYQ5TBA9 3013 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 A0A0J9YVX5 310 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 B4E171 279 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 GNAZP19086 355 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 VARSP26640 1264 aaKnown RBP29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 TSPAN7P41732 249 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms