RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TCP11L1Q9NUJ3 509 aa4.29□□□□□ -1.72
BRCA1-204ENST00000412061 ATP6V1HQ9UI12 483 aa4.29□□□□□ -1.72
BRCA1-204ENST00000412061 CDC14AQ9UNH5 594 aa4.29□□□□□ -1.72
BRCA1-204ENST00000412061 JRKLQ9Y4A0 524 aa4.29□□□□□ -1.72
BRCA1-204ENST00000412061 XKRY2A2RUG3 117 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 B4DGG1 531 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 GPRIN2O60269 458 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 ZNF821O75541 412 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 SYF2O95926 243 aaKnown RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 GSRP00390 522 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 IGHV2-70P01814 119 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 CALCBP10092 127 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 PRF1P14222 555 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 CORO1AP31146 461 aaKnown RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 APOBEC1P41238 236 aaKnown RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 PTGER3P43115 390 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 CLCNKAP51800 687 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 SLC34A1Q06495 639 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 GABPB1Q06547 395 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 ST3GAL1Q11201 340 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 TROAPQ12815 778 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 PLA2G7Q13093 441 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 LCP2Q13094 533 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 CUL3Q13618 768 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 PTGR1Q14914 329 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 ZMYND11Q15326 602 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 CARTPTQ16568 116 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 HSP90AB3PQ58FF7 597 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 WASHC2DQ5SRD0 308 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 FAM46CQ5VWP2 391 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 TPGS2Q68CL5 300 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 C16orf87Q6PH81 154 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 B3GNT6Q6ZMB0 384 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 TMEM26Q6ZUK4 368 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 RTN4RL2Q86UN3 420 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 MEX3DQ86XN8 651 aaKnown RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 TMEM199Q8N511 208 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 RNF148Q8N7C7 305 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 SLC38A9Q8NBW4 561 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 OR5M8Q8NGP6 311 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 ARRDC2Q8TBH0 407 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 INPP5DQ92835 1189 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 ZNF582Q96NG8 517 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 RAD9AQ99638 391 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 CCT7Q99832 543 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 SPAG8Q99932 426 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 C17orf62Q9BQA9 187 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 FAM234AQ9H0X4 552 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 CATSPERBQ9H7T0 1116 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 HHATLQ9HCP6 504 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 MMP25Q9NPA2 562 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 KRCC1Q9NPI7 259 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 FARSBQ9NSD9 589 aaKnown RBP4.28□□□□□ -1.72
BRCA1-204ENST00000412061 PIGVQ9NUD9 493 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 AIPL1Q9NZN9 384 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 TXNDC16Q9P2K2 825 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 KCNJ14Q9UNX9 436 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 GRIP1Q9Y3R0 1128 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 MFHAS1Q9Y4C4 1052 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 RAI2Q9Y5P3 530 aa4.28□□□□□ -1.72
BRCA1-204ENST00000412061 C15orf38-AP3S2A0A0A6YYH1 394 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 IGLV5-39A0A0G2JS06 123 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 PRSS51A0A1B0GVH4 220 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 ZSCAN5BA6NJL1 495 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 MS4A18H0YCH9 400 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 CHADO15335 359 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 SPINT2O43291 252 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 TLX2O43763 284 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-204ENST00000412061 OR10H2O60403 315 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 ERLIN1O75477 346 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 GMNNO75496 209 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 VNN2O95498 520 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 TMEM191BP0C7N4 346 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 ARSBP15848 533 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 GNLYP22749 145 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 PTPN4P29074 926 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 ENTPD1P49961 510 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 P2RX3P56373 397 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 ZP1P60852 638 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 IRX4P78413 519 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 FOXM1Q08050 763 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 DDX39BQ13838 428 aaKnown RBP4.27□□□□□ -1.73
BRCA1-204ENST00000412061 VEZF1Q14119 521 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 GPR18Q14330 331 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 PTGISQ16647 500 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 FILIP1LQ4L180 1135 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 ARHGAP17Q68EM7 881 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 SIGLEC15Q6ZMC9 328 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 MON1BQ7L1V2 547 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 TAS2R42Q7RTR8 314 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 LAX1Q8IWV1 398 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 DSELQ8IZU8 1212 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 GCSAMQ8N6F7 178 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 C7orf57Q8NEG2 295 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 ZNF548Q8NEK5 533 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-204ENST00000412061 OR13C2Q8NGS9 318 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 OR10T2Q8NGX3 314 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 HMGCLL1Q8TB92 370 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 GIMAP1Q8WWP7 306 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms