RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 PRSS55Q6UWB4 352 aaPredicted RBP3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 PRSS57Q6UWY2 283 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 ZSCAN30Q86W11 494 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 MAPKAPK5-AS1Q8N8E1 139 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 LPCAT1Q8NF37 534 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 OLIG1Q8TAK6 271 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 NUDCD2Q8WVJ2 157 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 ZNF583Q96ND8 569 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 URM1Q9BTM9 101 aaKnown RBP3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 SDCBP2Q9H190 292 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 TFB2MQ9H5Q4 396 aaKnown RBP3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 CHST11Q9NPF2 352 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 PNPLA3Q9NST1 481 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 SPG21Q9NZD8 308 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 PTTG2Q9NZH5 202 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 STX8Q9UNK0 236 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 KLK4Q9Y5K2 254 aa3.73□□□□□ -1.81
RNU2-28P-201ENST00000410457 IL16Q14005 1332 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 FAM149AA5PLN7 773 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 C17orf105B2RV13 164 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 C2CD4DB7Z1M9 353 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 C16orf97H3BN30 126 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 PGRMC2O15173 223 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 ZBTB14O43829 449 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 CRCPO75575 148 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 GLCEO94923 617 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 NTN1O95631 604 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 APOHP02749 345 aaPredicted RBP3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 SERPING1P05155 500 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 STAG3L1P0CL83 205 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 IGHV4-38-2P0DP08 117 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 LIFP15018 202 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 PIK3R1P27986 724 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 CDH11P55287 796 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 IL10RBQ08334 325 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 ACCSLQ4AC99 568 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 AARDQ4LEZ3 155 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 SLC35D3Q5M8T2 416 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 DCAF10Q5QP82 559 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 FAM46CQ5VWP2 391 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 ANO5Q75V66 913 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 RTN4RL2Q86UN3 420 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 ANKRD46Q86W74 232 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 CCDC83Q8IWF9 413 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 KLHDC8AQ8IYD2 350 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 CDK20Q8IZL9 346 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 TSACCQ96A04 125 aaPredicted RBP3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 NSL1Q96IY1 281 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 THOC3Q96J01 351 aaKnown RBP3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 ST6GAL2Q96JF0 529 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 MARK4Q96L34 752 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 UBQLN3Q9H347 655 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 AKIRIN1Q9H9L7 192 aaPredicted RBP3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 FAM207AQ9NSI2 230 aaPredicted RBP3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 COMMD8Q9NX08 183 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 FLRT3Q9NZU0 649 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 APPL1Q9UKG1 709 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 FBXW2Q9UKT8 454 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 ITM2BQ9Y287 266 aa3.72□□□□□ -1.81
RNU2-28P-201ENST00000410457 DENND3A2RUS2 1198 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 SMIM30A4D0T7 59 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 PRSS46E5RG02 174 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 NPIPA3F8WFD2 350 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 ATP6V0E1O15342 81 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 ATP9AO75110 1047 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 NME6O75414 186 aaPredicted RBP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 AKAP3O75969 853 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 NR3C1P04150 777 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 CETPP11597 493 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 NR1D1P20393 614 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 CYP2A7P20853 494 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 CSTF2P33240 577 aaKnown RBP eCLIP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 CTNNB1P35222 781 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 NKX2-1P43699 371 aaPredicted RBP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 OR3A1P47881 315 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 GAS1P54826 345 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 FOXG1P55316 489 aaPredicted RBP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 HERV-K104P61576 105 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 TRAP1Q12931 704 aaKnown RBP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 PKN2Q16513 984 aaKnown RBP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 SGCBQ16585 318 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 IZUMO4Q1ZYL8 232 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 LRRC38Q5VT99 294 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 FUT10Q6P4F1 479 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 SPSB3Q6PJ21 355 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 CNTN4Q8IWV2 1026 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 RTL3Q8N8U3 475 aaKnown RBP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 Q8N9P0 234 aaPredicted RBP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 SLC24A4Q8NFF2 622 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZBTB9Q96C00 473 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 EEF2KMTQ96G04 330 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 CDHR1Q96JP9 859 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 TSSK2Q96PF2 358 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 PANX3Q96QZ0 392 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 RASL10BQ96S79 203 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 OR2B2Q9GZK3 357 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 HIPK2Q9H2X6 1198 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 CPVLQ9H3G5 476 aa3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 UPF2Q9HAU5 1272 aaKnown RBP3.71□□□□□ -1.82
RNU2-28P-201ENST00000410457 GPR173Q9NS66 373 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms