RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 RIPOR3Q96MK2 946 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 TMEM74Q96NL1 305 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 NECTIN4Q96NY8 510 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 CIB1Q99828 191 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 WRAP53Q9BUR4 548 aaKnown RBP13.15□□□□□ -0.3
LIMS1-205ENST00000410093 OSBPL10Q9BXB5 764 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 VAPAQ9P0L0 249 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 ADGRE2Q9UHX3 823 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 INVSQ9Y283 1065 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 DYRK1BQ9Y463 629 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 RNF103-CHMP3A0A140T963 221 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 TBC1D3BA6NDS4 549 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 MGAT4DA6NG13 374 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 SPINT1O43278 529 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 PI15O43692 258 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 PRSS23O95084 383 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 CLPTM1O96005 669 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 SOD1P00441 154 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 HPRP00739 348 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 ITPKAP23677 461 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 IMPA1P29218 277 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 SLC6A11P48066 632 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 ACSM2AQ08AH3 577 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 BIRC2Q13490 618 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 RUNX3Q13761 415 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 DOC2AQ14183 400 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 ARHGAP19Q14CB8 494 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 ATAT1Q5SQI0 421 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 ANXA8L1Q5VT79 327 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 ACSM2BQ68CK6 577 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 KRT80Q6KB66 452 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 MED27Q6P2C8 311 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 CAMKMTQ7Z624 323 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 SERPINA11Q86U17 422 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 CALHM3Q86XJ0 350 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 MICU2Q8IYU8 434 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 DTWD1Q8N5C7 304 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 ZNF548Q8NEK5 533 aaPredicted RBP13.14□□□□□ -0.31
LIMS1-205ENST00000410093 TFAP2CQ92754 450 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 PYCR2Q96C36 320 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 REXO5Q96IC2 774 aaKnown RBP13.14□□□□□ -0.31
LIMS1-205ENST00000410093 PKP4Q99569 1192 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 CHID1Q9BWS9 393 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 SGPP1Q9BX95 441 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 YTHDF1Q9BYJ9 559 aaKnown RBP13.14□□□□□ -0.31
LIMS1-205ENST00000410093 PAIP1Q9H074 479 aaKnown RBP13.14□□□□□ -0.31
LIMS1-205ENST00000410093 ATG10Q9H0Y0 220 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 RPF2Q9H7B2 306 aaKnown RBP13.14□□□□□ -0.31
LIMS1-205ENST00000410093 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
LIMS1-205ENST00000410093 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
LIMS1-205ENST00000410093 CROCCQ5TZA2 2017 aa13.14□□□□□ -0.31
LIMS1-205ENST00000410093 C7orf72A4D263 438 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 H0YAE9 185 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 CLOCKO15516 846 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 DFNA5O60443 496 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SLC16A8O95907 504 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 ADH1BP00325 375 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 MTHFD1P11586 935 aaKnown RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 DDX5P17844 614 aaKnown RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 MTHFRP42898 656 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 OR4D2P58180 307 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 MTPNP58546 118 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 TUBA4AP68366 448 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 NRF1Q16656 503 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 DUOXA1Q1HG43 343 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 C6orf52Q5T4I8 152 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 GALNT18Q6P9A2 607 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SYCE2Q6PIF2 218 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 TRAPPC5Q8IUR0 188 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SYT12Q8IV01 421 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 LAS2Q8IYD9 372 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 CFAP206Q8IYR0 622 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 ALDH16A1Q8IZ83 802 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 RAD51AP1Q96B01 352 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 MTFMTQ96DP5 389 aaKnown RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 FAM120BQ96EK7 910 aaKnown RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 C11orf24Q96F05 449 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 COX14Q96I36 57 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 CPPED1Q9BRF8 314 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 PITHD1Q9GZP4 211 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 S1PR5Q9H228 398 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 MTG2Q9H4K7 406 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 FBRSQ9HAH7 460 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SGK2Q9HBY8 427 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 HPS4Q9NQG7 708 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 UBAP1Q9NZ09 502 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 MYRFQ9Y2G1 1151 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 DLGAP4Q9Y2H0 992 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 WBP11Q9Y2W2 641 aaKnown RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 NEUROG3Q9Y4Z2 214 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 FADS3Q9Y5Q0 445 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 CXCR6O00574 342 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 RFXANKO14593 260 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 KCNJ13O60928 360 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 H6PDO95479 791 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 APODP05090 189 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms