RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 TM9SF2Q99805 663 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 RBMX2Q9Y388 322 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 ISPDA4D126 451 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 KDM4BO94953 1096 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 AZGP1P25311 298 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 RAB28P51157 221 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 TSPAN18Q96SJ8 248 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 TVP23BQ9NYZ1 205 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 EDDM13A0A1B0GTR0 161 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 FAM221BA6H8Z2 402 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 KCNU1A8MYU2 1149 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 SOX1O00570 391 aaPredicted RBP10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 PPEF2O14830 753 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 MTX2O75431 263 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 C8orf89P0DMQ9 161 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 ID2Q02363 134 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 TEX44Q53QW1 395 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 ARSHQ5FYA8 562 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 SPATA31D1Q6ZQQ2 1576 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 ZNF554Q86TJ5 538 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 ZNF598Q86UK7 904 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 ACOT12Q8WYK0 555 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 KCNC2Q96PR1 638 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 LMO7Q8WWI1 1683 aa10.97□□□□□ -0.65
PRPF40A-202ENST00000410080 ADAMTS3O15072 1205 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 FAM92BQ6ZTR7 304 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 TMED4Q7Z7H5 227 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 ERVK-5Q9HDB9 667 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 GIN1Q9NXP7 522 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 DPPA5A6NC42 116 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 IFNA21P01568 189 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 NMBRP28336 390 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 TXNDC8Q6A555 127 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 CREG2Q8IUH2 290 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 OR8H1Q8NGG4 311 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 ALPK1Q96QP1 1244 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 SMURF2Q9HAU4 748 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 HTR3EA5X5Y0 456 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 SHOXO15266 292 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 PCDH7O60245 1069 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 CNOT4O95628 575 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 OR2B6P58173 313 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 RBM48Q5RL73 367 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 OR8S1Q8NH09 359 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 WDR12Q9GZL7 423 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 PDZD7Q9H5P4 517 aa10.96□□□□□ -0.65
PRPF40A-202ENST00000410080 PI15O43692 258 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 KRT36O76013 467 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 CLPXO76031 633 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 NADKO95544 446 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 XKP51811 444 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 CDH15P55291 814 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 ZACNQ401N2 412 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 FAM69BQ5VUD6 431 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 BBS12Q6ZW61 710 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 TBC1D21Q8IYX1 336 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 PHC3Q8NDX5 983 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 OR10A4Q9H209 315 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 CCSER2Q9H7U1 834 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 CHRAC1Q9NRG0 131 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 GRHL1Q9NZI5 618 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 ATXN7L1Q9ULK2 861 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 ARPC2O15144 300 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 ARRB1P49407 418 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 CLCN4P51793 760 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 NOMO3P69849 1222 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 FAM174BQ3ZCQ3 159 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 ZNF776Q68DI1 518 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 ABHD15Q6UXT9 468 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 JPH3Q8WXH2 748 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 CORO1CQ9ULV4 474 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 MYOCOSA0A1B0GUC4 107 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 J3QLW9 94 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 PLK4O00444 970 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 ZNF19P17023 458 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 HOXA10P31260 410 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 GABRB2P47870 512 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 USF2Q15853 346 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 SGCAQ16586 387 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 CCL14Q16627 93 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 DNAJB7Q7Z6W7 309 aaPredicted RBP10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 P2RX2Q9UBL9 471 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 B4GALT7Q9UBV7 327 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 ARFGEF2Q9Y6D5 1785 aa10.96□□□□□ -0.66
PRPF40A-202ENST00000410080 TCRBV9S1A1TA0A576 114 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CH25HO95992 272 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 IFNGR1P15260 489 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 GNRHRP30968 328 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 AIF1P55008 147 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SLBPQ14493 270 aaKnown RBP eCLIP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 TAF1AQ15573 450 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 MBLAC2Q68D91 279 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 LAPTM4BQ86VI4 370 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 TCF12Q99081 682 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 HOPXQ9BPY8 73 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 RHOJQ9H4E5 214 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 REV1Q9UBZ9 1251 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 AP1M2Q9Y6Q5 423 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 RGPD2P0DJD1 1756 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms