RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 MAGEB17A8MXT2 336 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 ISM1B1AKI9 464 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 H0YIV9 168 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 H7BY64 318 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 AIM2O14862 343 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 KDM1AO60341 852 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 DNAJC8O75937 253 aaPredicted RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 VIPP01282 170 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 CSF2P04141 144 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 IDO1P14902 403 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 GPX3P22352 226 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 NDUFS1P28331 727 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 PTPN4P29074 926 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 NXPH1P58417 271 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 GPR18Q14330 331 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 RBBP5Q15291 538 aaKnown RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 HIST2H2ACQ16777 129 aaPredicted RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 PAGE2BQ5JRK9 111 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 HIST2H2AA3Q6FI13 130 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 IQCHQ86VS3 1027 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 AMIGO1Q86WK6 493 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 ZNF761Q86XN6 746 aaPredicted RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 MAML2Q8IZL2 1156 aaPredicted RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 NAGSQ8N159 534 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 TMEM105Q8N8V8 129 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 RBM15BQ8NDT2 890 aaKnown RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 OR10G6Q8NH81 332 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 HUS1BQ8NHY5 278 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 WDR20Q8TBZ3 569 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 MS4A3Q96HJ5 214 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 PRAP1Q96NZ9 151 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 SRMSQ9H3Y6 488 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 SLC40A1Q9NP59 571 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 AIG1Q9NVV5 245 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 SPHK1Q9NYA1 384 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 CPNE7Q9UBL6 633 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 DOLKQ9UPQ8 538 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 PCDHGA11Q9Y5H2 935 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 PLXND1Q9Y4D7 1925 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 KNL1Q8NG31 2342 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 FEZF1A0PJY2 475 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 H0YHG0 523 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 NR5A2O00482 541 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 THRAP10827 490 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 G6PDP11413 515 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 NME1P15531 152 aaKnown RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 HOXA6P31267 233 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 CASP2P42575 452 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 AFF3P51826 1226 aaKnown RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 UFM1P61960 85 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 SLC25A3Q00325 362 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 EMX2Q04743 252 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 SF1Q15637 639 aaKnown RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 GSTA3Q16772 222 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 TJAP1Q5JTD0 557 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 LYSMD4Q5XG99 296 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 ICE2Q659A1 982 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 RIPOR1Q6ZS17 1223 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 LONP2Q86WA8 852 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 RP9Q8TA86 221 aaKnown RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 SLC37A2Q8TED4 501 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 ZDHHC1Q8WTX9 485 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 DNASE2BQ8WZ79 361 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 APIPQ96GX9 242 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 TEX37Q96LM6 180 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 BTBD10Q9BSF8 475 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 EFCAB11Q9BUY7 163 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 PCBD2Q9H0N5 130 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 C1orf109Q9NX04 203 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 TAS2R1Q9NYW7 299 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 NOP53Q9NZM5 478 aaKnown RBP12□□□□□ -0.49
CHMP3-204ENST00000409727 KLHL20Q9Y2M5 609 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 PCDHB11Q9Y5F2 797 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 GPR45Q9Y5Y3 372 aa12□□□□□ -0.49
CHMP3-204ENST00000409727 THADAQ6YHU6 1953 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 A0A1B0GVT2 93 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 SLC22A2O15244 555 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 NRP2O60462 931 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 HNRNPCL1O60812 293 aaKnown RBP11.99□□□□□ -0.49
CHMP3-204ENST00000409727 ETHE1O95571 254 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 CHRM5P08912 532 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-204ENST00000409727 TDGF1P13385 188 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 PRDX6P30041 224 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 PEBP1P30086 187 aaKnown RBP11.99□□□□□ -0.49
CHMP3-204ENST00000409727 ADSLP30566 484 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-204ENST00000409727 SHMT2P34897 504 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 NUDT2P50583 147 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 ATP4BP51164 291 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 CCR8P51685 355 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 RPS13P62277 151 aaKnown RBP11.99□□□□□ -0.49
CHMP3-204ENST00000409727 CYP4F2P78329 520 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 PCDH1Q08174 1060 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 RNF165Q6ZSG1 346 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 WDR5BQ86VZ2 330 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 PLD3Q8IV08 490 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 LIX1Q8N485 282 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 OR2A1Q8NGT9 310 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 CLHC1Q8NHS4 586 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 RCN3Q96D15 328 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 REPS1Q96D71 796 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms