RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PNPLA2Q96AD5 504 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 PPP1R2P1Q96PQ5 205 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 RBBP8Q99708 897 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 ADGRE3Q9BY15 652 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 FAM96AQ9H5X1 160 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 MAGEE1Q9HCI5 957 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 PIH1D1Q9NWS0 290 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 NOP53Q9NZM5 478 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 SLC17A6Q9P2U8 582 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 SOX13Q9UN79 622 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 SERPINE1P05121 402 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 ERVK-10P10266 1014 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 GRK2P25098 689 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 HADHAP40939 763 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 HSD11B2P80365 405 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 ABRQ12979 859 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 NFE2L1Q14494 772 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 PCSK7Q16549 785 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 CCDC153Q494R4 210 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 ARMC3Q5W041 872 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 PDPK2PQ6A1A2 396 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 DUS1LQ6P1R4 473 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 BPHLQ86WA6 291 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 DSELQ8IZU8 1212 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 CISD2Q8N5K1 135 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 DNAAF3Q8N9W5 541 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 NAT14Q8WUY8 206 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 SMAD5Q99717 465 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 GPR63Q9BZJ6 419 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 FBXO6Q9NRD1 293 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 NSMCE4AQ9NXX6 385 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 TCFL5Q9UL49 500 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 PCDHGB7Q9Y5F8 929 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 PIKFYVEQ9Y2I7 2098 aa12.28□□□□□ -0.44
CHRNA1-205ENST00000409542 UBA6A0AVT1 1052 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 OR5K3A6NET4 321 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 TLCD2A6NGC4 264 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 CAPN14A8MX76 684 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 MEN1O00255 615 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 POP7O75817 140 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 MT-CYBP00156 380 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 UGT1A6P19224 532 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 UGT1A1P22309 533 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 UGT1A4P22310 534 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 TYK2P29597 1187 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 ARL4DP49703 201 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 KPNA2P52292 529 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 CDH17Q12864 832 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 PCLAFQ15004 111 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 TEDDM1Q5T9Z0 273 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 KMT5CQ86Y97 462 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 RASGEF1AQ8N9B8 481 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 SPATA22Q8NHS9 363 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 TADA1Q96BN2 335 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 IMP4Q96G21 291 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 ANKRD27Q96NW4 1050 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 AGAP3Q96P47 875 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 VPS35Q96QK1 796 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 FCRL5Q96RD9 977 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 INSM2Q96T92 566 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 NRTNQ99748 197 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 MIPEPQ99797 713 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 MCMBPQ9BTE3 642 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 KIFC1Q9BW19 673 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 SLC29A3Q9BZD2 475 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 RNPEPL1Q9HAU8 725 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 SNX15Q9NRS6 342 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 HRASLS2Q9NWW9 162 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 SNX7Q9UNH6 387 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 AAR2Q9Y312 384 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 CROCCQ5TZA2 2017 aa12.27□□□□□ -0.44
CHRNA1-205ENST00000409542 CCDC88CQ9P219 2028 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 OR6C74A6NCV1 312 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 MASP2O00187 686 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 PEX11AO75192 247 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 ANXA9O76027 345 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 RAB40ALP0C0E4 278 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 ESRRAP11474 423 aaPredicted RBP12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 RORAP35398 523 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 HALP42357 657 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 CCNG1P51959 295 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 AQP5P55064 265 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 DMPKQ09013 629 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 OLIG2Q13516 323 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 ATP1A4Q13733 1029 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 PLCL1Q15111 1095 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 ZNF789Q5FWF6 425 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 TMEM220Q6QAJ8 160 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 FAM198BQ6UWH4 519 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 CES3Q6UWW8 571 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 STRA8Q7Z7C7 330 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 KCNMB4Q86W47 210 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 NLNQ9BYT8 704 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 NMUR2Q9GZQ4 415 aa12.27□□□□□ -0.45
CHRNA1-205ENST00000409542 RAD18Q9NS91 495 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms