RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TDRKHQ9Y2W6 561 aaKnown RBP20.01■□□□□ 0.79
USP39-203ENST00000409470 AK5Q9Y6K8 562 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 TICRRQ7Z2Z1 1910 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 UMPSP11172 480 aa20■□□□□ 0.79
USP39-203ENST00000409470 KELP23276 732 aa20■□□□□ 0.79
USP39-203ENST00000409470 RPS21P63220 83 aaKnown RBP20■□□□□ 0.79
USP39-203ENST00000409470 SLBPQ14493 270 aaKnown RBP eCLIP20■□□□□ 0.79
USP39-203ENST00000409470 AGERQ15109 404 aa20■□□□□ 0.79
USP39-203ENST00000409470 RUNDC3AQ59EK9 446 aa20■□□□□ 0.79
USP39-203ENST00000409470 PAGE2BQ5JRK9 111 aa20■□□□□ 0.79
USP39-203ENST00000409470 ANKRD46Q86W74 232 aa20■□□□□ 0.79
USP39-203ENST00000409470 MSRB3Q8IXL7 192 aa20■□□□□ 0.79
USP39-203ENST00000409470 OR2T12Q8NG77 320 aa20■□□□□ 0.79
USP39-203ENST00000409470 OR10A6Q8NH74 314 aa20■□□□□ 0.79
USP39-203ENST00000409470 OR14C36Q8NHC7 312 aa20■□□□□ 0.79
USP39-203ENST00000409470 ZNF583Q96ND8 569 aa20■□□□□ 0.79
USP39-203ENST00000409470 IL17FQ96PD4 163 aa20■□□□□ 0.79
USP39-203ENST00000409470 RPF2Q9H7B2 306 aaKnown RBP20■□□□□ 0.79
USP39-203ENST00000409470 DNMT3AQ9Y6K1 912 aaPredicted RBP20■□□□□ 0.79
USP39-203ENST00000409470 A0A096LPI6 279 aa20■□□□□ 0.79
USP39-203ENST00000409470 GSTA4O15217 222 aa20■□□□□ 0.79
USP39-203ENST00000409470 KMOO15229 486 aa20■□□□□ 0.79
USP39-203ENST00000409470 ETHE1O95571 254 aa20■□□□□ 0.79
USP39-203ENST00000409470 DNTTP04053 509 aa20■□□□□ 0.79
USP39-203ENST00000409470 LYNP07948 512 aa20■□□□□ 0.79
USP39-203ENST00000409470 C1GALT1C1LP0DN25 315 aa20■□□□□ 0.79
USP39-203ENST00000409470 FASP25445 335 aa20■□□□□ 0.79
USP39-203ENST00000409470 E2F2Q14209 437 aa20■□□□□ 0.79
USP39-203ENST00000409470 FGL2Q14314 439 aa20■□□□□ 0.79
USP39-203ENST00000409470 SF1Q15637 639 aaKnown RBP20■□□□□ 0.79
USP39-203ENST00000409470 NRF1Q16656 503 aa20■□□□□ 0.79
USP39-203ENST00000409470 HIST2H2ACQ16777 129 aaPredicted RBP20■□□□□ 0.79
USP39-203ENST00000409470 GTDC1Q4AE62 458 aa20■□□□□ 0.79
USP39-203ENST00000409470 ATG9BQ674R7 924 aa20■□□□□ 0.79
USP39-203ENST00000409470 HIST2H2AA3Q6FI13 130 aa20■□□□□ 0.79
USP39-203ENST00000409470 DCUN1D3Q8IWE4 304 aa20■□□□□ 0.79
USP39-203ENST00000409470 LRRC56Q8IYG6 542 aaPredicted RBP20■□□□□ 0.79
USP39-203ENST00000409470 TMEM132CQ8N3T6 1108 aa20■□□□□ 0.79
USP39-203ENST00000409470 OXR1Q8N573 874 aa20■□□□□ 0.79
USP39-203ENST00000409470 DTWD1Q8N5C7 304 aa20■□□□□ 0.79
USP39-203ENST00000409470 TRPV3Q8NET8 790 aa20■□□□□ 0.79
USP39-203ENST00000409470 SLC5A11Q8WWX8 675 aa20■□□□□ 0.79
USP39-203ENST00000409470 BIRC7Q96CA5 298 aa20■□□□□ 0.79
USP39-203ENST00000409470 METTL2AQ96IZ6 378 aaKnown RBP20■□□□□ 0.79
USP39-203ENST00000409470 CIB1Q99828 191 aa20■□□□□ 0.79
USP39-203ENST00000409470 EFCAB11Q9BUY7 163 aa20■□□□□ 0.79
USP39-203ENST00000409470 PAIP1Q9H074 479 aaKnown RBP20■□□□□ 0.79
USP39-203ENST00000409470 PHPT1Q9NRX4 125 aaPredicted RBP20■□□□□ 0.79
USP39-203ENST00000409470 MAN2B2Q9Y2E5 1009 aa20■□□□□ 0.79
USP39-203ENST00000409470 PCDHB14Q9Y5E9 798 aa20■□□□□ 0.79
USP39-203ENST00000409470 CROCCQ5TZA2 2017 aa20■□□□□ 0.79
USP39-203ENST00000409470 PI15O43692 258 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 BMP2P12643 396 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 ZNF26P17031 533 aaPredicted RBP19.99■□□□□ 0.79
USP39-203ENST00000409470 KIR3DL1P43629 444 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 RPS13P62277 151 aaKnown RBP19.99■□□□□ 0.79
USP39-203ENST00000409470 HTR4Q13639 388 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 PDK3Q15120 406 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 TMEM196Q5HYL7 178 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 OR4F3Q6IEY1 312 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 C1orf52Q8N6N3 182 aaKnown RBP19.99■□□□□ 0.79
USP39-203ENST00000409470 ANKFN1Q8N957 763 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 TNIP2Q8NFZ5 429 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 INPP5KQ9BT40 448 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 OSBPL6Q9BZF3 934 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 SLC6A17Q9H1V8 727 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 IKZF5Q9H5V7 419 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 SERHLQ9NQF3 203 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 INVSQ9Y283 1065 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 AP3M1Q9Y2T2 418 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 AP4B1Q9Y6B7 739 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 V9GYQ6 96 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 XIRP2A4UGR9 3374 aa19.99■□□□□ 0.79
USP39-203ENST00000409470 PRMT3O60678 531 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 SMNDC1O75940 238 aaKnown RBP eCLIP19.98■□□□□ 0.79
USP39-203ENST00000409470 RPN2P04844 631 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 GSNP06396 782 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 ZCCHC18P0CG32 403 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 GGT1P19440 569 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 NUMA1Q14980 2115 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 DPY19L1Q2PZI1 675 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 METRNLQ641Q3 311 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 C2orf73Q8N5S3 287 aaPredicted RBP19.98■□□□□ 0.79
USP39-203ENST00000409470 TP53I13Q8NBR0 393 aaPredicted RBP19.98■□□□□ 0.79
USP39-203ENST00000409470 GPR156Q8NFN8 814 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 WDR34Q96EX3 536 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 GBP5Q96PP8 586 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 SLC6A13Q9NSD5 602 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 GEMIN8Q9NWZ8 242 aaKnown RBP19.98■□□□□ 0.79
USP39-203ENST00000409470 CFAP20Q9Y6A4 193 aaKnown RBP19.98■□□□□ 0.79
USP39-203ENST00000409470 SZT2Q5T011 3432 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 A0A1W2PQU0 124 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 DENRO43583 198 aaKnown RBP19.98■□□□□ 0.79
USP39-203ENST00000409470 ANXA6P08133 673 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 FCGR1AP12314 374 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 COX7A2P14406 83 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 CTHP32929 405 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 TRIM23P36406 574 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 SRSF11Q05519 484 aaKnown RBP19.98■□□□□ 0.79
USP39-203ENST00000409470 SPIN4Q56A73 249 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms