RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SMG9Q9H0W8 520 aaKnown RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 PARVBQ9HBI1 364 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 GULP1Q9UBP9 304 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 CD84Q9UIB8 345 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 HS3ST2Q9Y278 367 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 ERGIC3Q9Y282 383 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 BCKDKO14874 412 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 MTX2O75431 263 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ADRA2AP08913 450 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 CCDC159P0C7I6 412 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 LINC00271P0C7V0 271 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 EEF1B2P24534 225 aaKnown RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 FMO3P31513 532 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 PPP3CCP48454 512 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 KCNJ10P78508 379 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 GAB1Q13480 694 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 BFSP2Q13515 415 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 PARP8Q8N3A8 854 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 LILRA3Q8N6C8 439 aaPredicted RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 CHST14Q8NCH0 376 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 SELENOMQ8WWX9 145 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 C2orf49Q9BVC5 232 aaPredicted RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 REXO4Q9GZR2 422 aaKnown RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 ING2Q9H160 280 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ATP13A3Q9H7F0 1226 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ARL15Q9NXU5 204 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 CCL26Q9Y258 94 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 FUOMA2VDF0 154 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 C16orf96A6NNT2 1141 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 FADS2P1A8MWK0 482 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 GSTA4O15217 222 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ANXA5P08758 320 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 CD97P48960 835 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 SPINT3P49223 89 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 PHEXP78562 749 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 KEAP1Q14145 624 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 E2F2Q14209 437 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 PRSS53Q2L4Q9 553 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ZNF648Q5T619 568 aaPredicted RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 TMEM215Q68D42 235 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 SNX29P2Q8IUI4 249 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ADHFE1Q8IWW8 467 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 KLHDC8AQ8IYD2 350 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 DNAJB8Q8NHS0 232 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 PPP1R14BQ96C90 147 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ZBTB18Q99592 522 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 RSPO3Q9BXY4 272 aaPredicted RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 INIPQ9NRY2 104 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 FAF1Q9UNN5 650 aaPredicted RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 E7EQ34 232 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 EIF3FO00303 357 aaPredicted RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 HOXA2O43364 376 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 CCNDBP1O95273 360 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 PRPS2P11908 318 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 CYP4B1P13584 511 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ITPKAP23677 461 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ALDH7A1P49419 539 aaKnown RBP9.54□□□□□ -0.88
MSH2-202ENST00000406134 CCL23P55773 120 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 EPS8Q12929 822 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 IL18R1Q13478 541 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 MPP7Q5T2T1 576 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 CBLL1Q75N03 491 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 CYP2U1Q7Z449 544 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 EID3Q8N140 333 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 OR8J2Q8NGG1 315 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 APOLD1Q96LR9 279 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 NODALQ96S42 347 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 PITX2Q99697 317 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 BEGAINQ9BUH8 593 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 ASPSCR1Q9BZE9 553 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 VPS4AQ9UN37 437 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 B3GNT3Q9Y2A9 372 aa9.54□□□□□ -0.88
MSH2-202ENST00000406134 hCG_2039718K7EN88 272 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 RECKO95980 971 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 FTH1P02794 183 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 GJA1P17302 382 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 S100A3P33764 101 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 KRT20P35900 424 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 CCR2P41597 374 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 PTPN5P54829 565 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 C21orf59P57076 290 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 SLC7A9P82251 487 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 MVKQ03426 396 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 VAC14Q08AM6 782 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 C22orf39Q6P5X5 142 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 DPY19L3Q6ZPD9 716 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 MSANTD1Q6ZTZ1 278 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 DYNC2LI1Q8TCX1 351 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 SDCCAG3Q96C92 435 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 FAM120BQ96EK7 910 aaKnown RBP9.53□□□□□ -0.88
MSH2-202ENST00000406134 ALPK1Q96QP1 1244 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 SH3GL1Q99961 368 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 PALMDQ9NP74 551 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 SH2B3Q9UQQ2 575 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 ANGPTL3Q9Y5C1 460 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 PCDHGA12O60330 932 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 ADAM23O75077 832 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 MPC1LP0DKB6 136 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 JUPP14923 745 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 ENGP17813 658 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms