RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ZNF106Q9H2Y7 1883 aaKnown RBP19.27■□□□□ 0.67
CCDC47-202ENST00000403162 RGS10O43665 173 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 SEC24AO95486 1093 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 PSMB9P28065 219 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 ALDH4A1P30038 563 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 LINGO4Q6UY18 593 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 OR10Q1Q8NGQ4 319 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 ANKHQ9HCJ1 492 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 ACOT13Q9NPJ3 140 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 FAM32AQ9Y421 112 aaKnown RBP19.26■□□□□ 0.67
CCDC47-202ENST00000403162 TTC34A8MYJ7 566 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 GRM6O15303 877 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 CLDN9O95484 217 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 KLKB1P03952 638 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 SEMG1P04279 462 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 GSNP06396 782 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 CYP4B1P13584 511 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 PCSK2P16519 638 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 FPR1P21462 350 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 FUT4P22083 530 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 DNAJA1P31689 397 aaKnown RBP19.26■□□□□ 0.67
CCDC47-202ENST00000403162 CA5AP35218 305 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 LSM3P62310 102 aaKnown RBP19.26■□□□□ 0.67
CCDC47-202ENST00000403162 FADDQ13158 208 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 TMEM236Q5W0B7 351 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 MSANTD1Q6ZTZ1 278 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 SERPINA11Q86U17 422 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 TSPYL5Q86VY4 417 aaPredicted RBP19.26■□□□□ 0.67
CCDC47-202ENST00000403162 SNX29P2Q8IUI4 249 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 BEND7Q8N7W2 519 aaPredicted RBP19.26■□□□□ 0.67
CCDC47-202ENST00000403162 SAMD11Q96NU1 681 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 HHIPQ96QV1 700 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 C19orf43Q9BQ61 176 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 SLIRPQ9GZT3 109 aaKnown RBP19.26■□□□□ 0.67
CCDC47-202ENST00000403162 NKX2-4Q9H2Z4 354 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 CERS4Q9HA82 394 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 MSRAQ9UJ68 235 aa19.26■□□□□ 0.67
CCDC47-202ENST00000403162 SCN8AQ9UQD0 1980 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 TRBV5-4A0A0C4DH59 114 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 H0Y626 953 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 STK16O75716 305 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 TRIM16O95361 564 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ZNF682O95780 498 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ATF6P18850 670 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 CDKN2CP42773 168 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 TUFMP49411 452 aaKnown RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ERVK-21P61565 698 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 UBE3AQ05086 875 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 NFATC2Q13469 925 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 GTF2H3Q13889 308 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 MAD2L1BPQ15013 274 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 INO80DQ53TQ3 878 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 CCDC81Q6ZN84 652 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ZNF551Q7Z340 670 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 TTC29Q8NA56 475 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ZNF540Q8NDQ6 660 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 TTC16Q8NEE8 873 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 HEPHQ9BQS7 1158 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ASB8Q9H765 288 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 RANBP2P49792 3224 aaKnown RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 PRRG1O14668 218 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 PDYNP01213 254 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ALPIP09923 528 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 CTPS1P17812 591 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ITGALP20701 1170 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 CORO1AP31146 461 aaKnown RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 NCS1P62166 190 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 LYPLAL1Q5VWZ2 237 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 TTC23LQ6PF05 361 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 MACC1Q6ZN28 852 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 ANKRD46Q86W74 232 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 CLDN19Q8N6F1 224 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 IPCEF1Q8WWN9 437 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 SIGLEC11Q96RL6 698 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 EMILIN2Q9BXX0 1053 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 EPS8L2Q9H6S3 715 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 AASSQ9UDR5 926 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 OSGIN1Q9UJX0 560 aa19.25■□□□□ 0.67
CCDC47-202ENST00000403162 GPC6Q9Y625 555 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-202ENST00000403162 HTR3EA5X5Y0 456 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 CLDN24A6NM45 220 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 HIDE1A8MVS5 230 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 KDM1AO60341 852 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 STC2O76061 302 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 FADS2O95864 444 aaKnown RBP19.24■□□□□ 0.67
CCDC47-202ENST00000403162 PRPH2P23942 346 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 ACRV1P26436 265 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 HOXA9P31269 272 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 DGCR6Q14129 220 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 LAPTM4AQ15012 233 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 RAB30Q15771 203 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 INAVAQ3KP66 663 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 ARMC12Q5T9G4 340 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 DOK6Q6PKX4 331 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 ZNF783Q6ZMS7 281 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 MRPL43Q8N983 215 aaKnown RBP19.24■□□□□ 0.67
CCDC47-202ENST00000403162 PIH1D2Q8WWB5 315 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 MTFMTQ96DP5 389 aaKnown RBP19.24■□□□□ 0.67
CCDC47-202ENST00000403162 MYO19Q96H55 970 aa19.24■□□□□ 0.67
CCDC47-202ENST00000403162 PPT2Q9UMR5 302 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms